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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS06425 and PFLU_RS06430 are separated by 106 nucleotides
PFLU_RS06430 and PFLU_RS06435 are separated by 198 nucleotides
PFLU_RS06435 and PFLU_RS06440 are separated by 389 nucleotides
PFLU_RS06440 and PFLU_RS06445 are separated by 108 nucleotides
PFLU_RS06425: PFLU_RS06425 - peptidoglycan DD-metalloendopeptidase family protein, at 1,438,613 to 1,439,449
_RS06425
PFLU_RS06430: PFLU_RS06430 - RNA polymerase sigma factor RpoS, at 1,439,556 to 1,440,560
_RS06430
PFLU_RS06435: PFLU_RS06435 - cold-shock protein, at 1,440,759 to 1,440,968
_RS06435
PFLU_RS06440: PFLU_RS06440 - dCTP deaminase, at 1,441,358 to 1,441,924
_RS06440
PFLU_RS06445: PFLU_RS06445 - hypothetical protein, at 1,442,033 to 1,442,245
_RS06445
Group
Condition
PFLU
_RS06425
PFLU
_RS06430
PFLU
_RS06435
PFLU
_RS06440
PFLU
_RS06445
carbon source
D-Xylose (C)
N.D.
-0.4
N.D.
-3.8
N.D.
carbon source
D-Xylose (C)
N.D.
-0.8
N.D.
-2.7
N.D.
carbon source
D,L-Lactate (C)
N.D.
+0.5
N.D.
-3.8
N.D.
carbon source
NAG (C)
N.D.
+0.6
N.D.
-3.9
N.D.
carbon source
NAG (C)
N.D.
+0.5
N.D.
-3.9
N.D.
carbon source
D,L-Lactate (C)
N.D.
+0.4
N.D.
-3.2
N.D.
carbon source
acetate (C)
N.D.
+0.3
N.D.
-2.5
N.D.
carbon source
acetate (C)
N.D.
+0.7
N.D.
-2.6
N.D.
carbon source
L-Arabinose (C); with MOPS
N.D.
+0.2
N.D.
-2.0
N.D.
carbon source
L-Arabinose (C); with MOPS
N.D.
+0.1
N.D.
-1.9
N.D.
carbon source
succinate (C)
N.D.
+0.3
N.D.
-1.9
N.D.
carbon source
Trisodium citrate (C)
N.D.
+0.4
N.D.
-2.0
N.D.
carbon source
succinate (C); with MOPS
N.D.
+0.2
N.D.
-1.8
N.D.
carbon source
D-Glucose (C); with MOPS
N.D.
+0.2
N.D.
-1.8
N.D.
carbon source
D-Glucose (C); with MOPS
N.D.
+0.4
N.D.
-1.9
N.D.
carbon source
Trisodium citrate (C)
N.D.
+0.4
N.D.
-2.0
N.D.
carbon source
Trisodium citrate (C); with MOPS
N.D.
+0.4
N.D.
-1.9
N.D.
carbon source
D-Glucose (C)
N.D.
+0.3
N.D.
-1.9
N.D.
carbon source
Trisodium citrate (C); with MOPS
N.D.
+0.3
N.D.
-1.9
N.D.
carbon source
D-Glucose (C)
N.D.
+0.4
N.D.
-1.9
N.D.
carbon source
succinate (C); with MOPS
N.D.
+0.3
N.D.
-1.8
N.D.
carbon source
Trisodium citrate (C); with MOPS
N.D.
+0.4
N.D.
-1.9
N.D.
carbon source
Trisodium citrate (C)
N.D.
+0.4
N.D.
-1.9
N.D.
carbon source
NAG (C); with MOPS
N.D.
+0.5
N.D.
-1.9
N.D.
carbon source
NAG (C); with MOPS
N.D.
+0.5
N.D.
-1.9
N.D.
carbon source
D-Glucose (C)
N.D.
+0.5
N.D.
-1.9
N.D.
carbon source
succinate (C)
N.D.
+0.6
N.D.
-1.9
N.D.
carbon source
succinate (C)
N.D.
+0.6
N.D.
-1.9
N.D.
carbon source
L-Arabinose (C)
N.D.
+0.4
N.D.
-1.7
N.D.
carbon source
acetate (C)
N.D.
+0.6
N.D.
-1.6
N.D.
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