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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS06380 and PFLU_RS06385 overlap by 4 nucleotides
PFLU_RS06385 and PFLU_RS06390 are separated by 120 nucleotides
PFLU_RS06390 and PFLU_RS06395 are separated by 109 nucleotides
PFLU_RS06395 and PFLU_RS06400 are separated by 8 nucleotides
PFLU_RS06380: PFLU_RS06380 - cell division protein FtsB, at 1,431,333 to 1,431,611
_RS06380
PFLU_RS06385: PFLU_RS06385 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 1,431,608 to 1,432,315
_RS06385
PFLU_RS06390: PFLU_RS06390 - LysR family transcriptional regulator, at 1,432,436 to 1,433,332
_RS06390
PFLU_RS06395: PFLU_RS06395 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, at 1,433,442 to 1,434,554
_RS06395
PFLU_RS06400: PFLU_RS06400 - S-formylglutathione hydrolase, at 1,434,563 to 1,435,408
_RS06400
Group
Condition
PFLU
_RS06380
PFLU
_RS06385
PFLU
_RS06390
PFLU
_RS06395
PFLU
_RS06400
carbon source
succinate (C)
N.D.
N.D.
-0.1
-0.2
-0.1
carbon source
Trisodium citrate (C)
N.D.
N.D.
-0.1
+0.2
-0.4
carbon source
NAG (C); with MOPS
N.D.
N.D.
-0.2
+0.2
-0.3
carbon source
NAG (C)
N.D.
N.D.
-0.2
+0.1
-0.2
carbon source
D,L-Lactate (C)
N.D.
N.D.
-0.1
+0.2
-0.3
carbon source
Trisodium citrate (C); with MOPS
N.D.
N.D.
-0.1
+0.2
-0.2
carbon source
D-Glucose (C); with MOPS
N.D.
N.D.
+0.1
+0.0
-0.2
carbon source
NAG (C)
N.D.
N.D.
-0.1
+0.2
-0.2
carbon source
D-Glucose (C)
N.D.
N.D.
-0.0
-0.3
+0.2
carbon source
NAG (C); with MOPS
N.D.
N.D.
-0.1
+0.2
-0.2
carbon source
succinate (C); with MOPS
N.D.
N.D.
+0.0
+0.1
-0.1
carbon source
Trisodium citrate (C)
N.D.
N.D.
+0.0
+0.3
-0.3
carbon source
succinate (C); with MOPS
N.D.
N.D.
+0.0
+0.3
-0.2
carbon source
Trisodium citrate (C); with MOPS
N.D.
N.D.
-0.0
-0.3
+0.5
carbon source
L-Arabinose (C)
N.D.
N.D.
+0.2
+0.3
-0.4
carbon source
D-Glucose (C); with MOPS
N.D.
N.D.
-0.1
+0.1
+0.2
carbon source
succinate (C)
N.D.
N.D.
-0.1
+0.2
+0.2
carbon source
L-Arabinose (C)
N.D.
N.D.
+0.0
-0.0
+0.2
carbon source
acetate (C)
N.D.
N.D.
-0.0
-0.1
+0.3
carbon source
Trisodium citrate (C); with MOPS
N.D.
N.D.
+0.1
+0.0
+0.2
carbon source
D-Glucose (C)
N.D.
N.D.
-0.0
+0.0
+0.3
carbon source
D-Glucose (C); with MOPS
N.D.
N.D.
+0.0
+0.2
+0.1
carbon source
NAG (C); with MOPS
N.D.
N.D.
-0.0
+0.3
+0.0
carbon source
L-Arabinose (C)
N.D.
N.D.
+0.2
-0.1
+0.3
carbon source
succinate (C)
N.D.
N.D.
+0.0
+0.2
+0.2
carbon source
succinate (C); with MOPS
N.D.
N.D.
-0.0
+0.1
+0.3
carbon source
L-Arabinose (C); with MOPS
N.D.
N.D.
-0.0
+0.2
+0.3
carbon source
L-Arabinose (C); with MOPS
N.D.
N.D.
+0.1
+0.1
+0.3
carbon source
acetate (C)
N.D.
N.D.
+0.0
+0.6
+0.0
carbon source
acetate (C)
N.D.
N.D.
+0.1
+0.5
+0.3
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