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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS06370 and PFLU_RS06375 are separated by 157 nucleotides
PFLU_RS06375 and PFLU_RS06380 are separated by 180 nucleotides
PFLU_RS06380 and PFLU_RS06385 overlap by 4 nucleotides
PFLU_RS06385 and PFLU_RS06390 are separated by 120 nucleotides
PFLU_RS06370: PFLU_RS06370 - 3-deoxy-8-phosphooctulonate synthase, at 1,428,860 to 1,429,705
_RS06370
PFLU_RS06375: PFLU_RS06375 - phosphopyruvate hydratase, at 1,429,863 to 1,431,152
_RS06375
PFLU_RS06380: PFLU_RS06380 - cell division protein FtsB, at 1,431,333 to 1,431,611
_RS06380
PFLU_RS06385: PFLU_RS06385 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 1,431,608 to 1,432,315
_RS06385
PFLU_RS06390: PFLU_RS06390 - LysR family transcriptional regulator, at 1,432,436 to 1,433,332
_RS06390
Group
Condition
PFLU
_RS06370
PFLU
_RS06375
PFLU
_RS06380
PFLU
_RS06385
PFLU
_RS06390
carbon source
NAG (C)
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
NAG (C); with MOPS
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
succinate (C)
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
acetate (C)
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
succinate (C)
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
NAG (C); with MOPS
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
acetate (C)
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
D-Glucose (C); with MOPS
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
Trisodium citrate (C)
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
Trisodium citrate (C); with MOPS
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
D,L-Lactate (C)
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
NAG (C)
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
Trisodium citrate (C)
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
L-Arabinose (C); with MOPS
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
NAG (C); with MOPS
N.D.
N.D.
N.D.
N.D.
-0.0
carbon source
Trisodium citrate (C); with MOPS
N.D.
N.D.
N.D.
N.D.
-0.0
carbon source
L-Arabinose (C); with MOPS
N.D.
N.D.
N.D.
N.D.
-0.0
carbon source
L-Arabinose (C)
N.D.
N.D.
N.D.
N.D.
+0.0
carbon source
Trisodium citrate (C)
N.D.
N.D.
N.D.
N.D.
+0.0
carbon source
succinate (C); with MOPS
N.D.
N.D.
N.D.
N.D.
+0.0
carbon source
acetate (C)
N.D.
N.D.
N.D.
N.D.
+0.0
carbon source
Trisodium citrate (C); with MOPS
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
L-Arabinose (C); with MOPS
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
D-Xylose (C)
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
acetate (C)
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
D-Glucose (C); with MOPS
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
D-Xylose (C)
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
L-Arabinose (C)
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
L-Arabinose (C)
N.D.
N.D.
N.D.
N.D.
+0.2
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