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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS06320 and PFLU_RS06325 are separated by 3 nucleotides
PFLU_RS06325 and PFLU_RS06330 are separated by 111 nucleotides
PFLU_RS06330 and PFLU_RS06335 overlap by 4 nucleotides
PFLU_RS06335 and PFLU_RS06340 are separated by 2 nucleotides
PFLU_RS06320: PFLU_RS06320 - OmpH family outer membrane protein, at 1,416,131 to 1,416,634
_RS06320
PFLU_RS06325: PFLU_RS06325 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 1,416,638 to 1,417,693
_RS06325
PFLU_RS06330: PFLU_RS06330 - 3-hydroxyacyl-ACP dehydratase FabZ, at 1,417,805 to 1,418,245
_RS06330
PFLU_RS06335: PFLU_RS06335 - acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase, at 1,418,242 to 1,419,018
_RS06335
PFLU_RS06340: PFLU_RS06340 - lipid-A-disaccharide synthase, at 1,419,021 to 1,420,160
_RS06340
Group
Condition
PFLU
_RS06320
PFLU
_RS06325
PFLU
_RS06330
PFLU
_RS06335
PFLU
_RS06340
carbon source
L-Arabinose (C)
-6.5
N.D.
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C)
-6.4
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
-6.2
N.D.
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C); with MOPS
-5.8
N.D.
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C); with MOPS
-4.7
N.D.
N.D.
N.D.
N.D.
carbon source
NAG (C); with MOPS
-4.3
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
-3.6
N.D.
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C); with MOPS
-3.5
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
-3.3
N.D.
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C)
-3.3
N.D.
N.D.
N.D.
N.D.
carbon source
NAG (C); with MOPS
-2.6
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-2.5
N.D.
N.D.
N.D.
N.D.
carbon source
NAG (C); with MOPS
-2.5
N.D.
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C); with MOPS
-2.3
N.D.
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
-2.2
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C); with MOPS
-2.2
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-2.0
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-1.9
N.D.
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
-1.9
N.D.
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
-1.8
N.D.
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C); with MOPS
-1.6
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C); with MOPS
-1.4
N.D.
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C); with MOPS
-1.3
N.D.
N.D.
N.D.
N.D.
carbon source
succinate (C)
-1.3
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C); with MOPS
-1.2
N.D.
N.D.
N.D.
N.D.
carbon source
succinate (C); with MOPS
-1.2
N.D.
N.D.
N.D.
N.D.
carbon source
succinate (C)
-1.2
N.D.
N.D.
N.D.
N.D.
carbon source
succinate (C); with MOPS
-1.1
N.D.
N.D.
N.D.
N.D.
carbon source
succinate (C); with MOPS
-1.0
N.D.
N.D.
N.D.
N.D.
carbon source
succinate (C)
-0.9
N.D.
N.D.
N.D.
N.D.
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