Private Fitness
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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS05925 and PFLU_RS05930 are separated by 62 nucleotides
PFLU_RS05930 and PFLU_RS05935 are separated by 3 nucleotides
PFLU_RS05935 and PFLU_RS05940 are separated by 68 nucleotides
PFLU_RS05940 and PFLU_RS05945 are separated by 102 nucleotides
PFLU_RS05925: PFLU_RS05925 - ferredoxin--NADP reductase, at 1,325,120 to 1,325,899
_RS05925
PFLU_RS05930: PFLU_RS05930 - tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO, at 1,325,962 to 1,326,657
_RS05930
PFLU_RS05935: PFLU_RS05935 - DUF1456 family protein, at 1,326,661 to 1,327,122
_RS05935
PFLU_RS05940: PFLU_RS05940 - RNA-binding protein S4, at 1,327,191 to 1,327,901
_RS05940
PFLU_RS05945: PFLU_RS05945 - GNAT family N-acetyltransferase, at 1,328,004 to 1,328,471
_RS05945
Group
Condition
PFLU
_RS05925
PFLU
_RS05930
PFLU
_RS05935
PFLU
_RS05940
PFLU
_RS05945
carbon source
NAG (C); with MOPS
N.D.
-0.2
-0.8
-0.3
+0.0
carbon source
acetate (C)
N.D.
-0.2
-0.9
+0.3
-0.0
carbon source
succinate (C); with MOPS
N.D.
-0.1
-0.3
+0.1
-0.1
carbon source
acetate (C)
N.D.
+0.3
-0.5
-0.1
+0.1
carbon source
Trisodium citrate (C); with MOPS
N.D.
-0.1
+0.2
-0.2
-0.0
carbon source
D-Xylose (C)
N.D.
+0.0
+0.2
-0.3
+0.0
carbon source
L-Arabinose (C); with MOPS
N.D.
+0.1
-0.1
-0.2
+0.2
carbon source
acetate (C)
N.D.
+0.1
-0.1
-0.2
+0.1
carbon source
Trisodium citrate (C); with MOPS
N.D.
-0.1
+0.3
-0.1
-0.0
carbon source
D-Glucose (C)
N.D.
-0.1
+0.2
-0.0
+0.1
carbon source
succinate (C)
N.D.
-0.0
-0.1
+0.3
+0.0
carbon source
Trisodium citrate (C)
N.D.
-0.0
+0.3
-0.0
-0.1
carbon source
D,L-Lactate (C)
N.D.
-0.0
+0.5
-0.0
-0.1
carbon source
L-Arabinose (C)
N.D.
-0.1
+0.2
+0.2
+0.1
carbon source
Trisodium citrate (C)
N.D.
-0.1
+0.3
-0.1
+0.2
carbon source
D-Glucose (C); with MOPS
N.D.
-0.0
+0.1
+0.2
+0.1
carbon source
L-Arabinose (C)
N.D.
-0.0
+0.2
+0.3
+0.0
carbon source
D-Glucose (C)
N.D.
-0.1
+0.4
+0.0
+0.1
carbon source
D,L-Lactate (C)
N.D.
+0.0
+0.2
+0.1
+0.1
carbon source
succinate (C); with MOPS
N.D.
+0.0
+0.3
+0.1
-0.0
carbon source
NAG (C); with MOPS
N.D.
-0.0
+0.8
-0.2
-0.1
carbon source
acetate (C)
N.D.
+0.2
+0.5
+0.0
+0.0
carbon source
NAG (C); with MOPS
N.D.
+0.1
+0.5
+0.2
-0.0
carbon source
succinate (C)
N.D.
+0.1
+0.6
+0.1
-0.1
carbon source
succinate (C); with MOPS
N.D.
+0.2
+0.5
+0.3
-0.1
carbon source
L-Arabinose (C); with MOPS
N.D.
+0.1
+0.8
+0.1
-0.2
carbon source
D-Glucose (C); with MOPS
N.D.
-0.1
+1.0
+0.1
-0.1
carbon source
L-Arabinose (C); with MOPS
N.D.
-0.1
+0.8
+0.1
+0.2
carbon source
D-Glucose (C)
N.D.
+0.0
+0.7
+0.2
+0.1
carbon source
L-Arabinose (C)
N.D.
-0.2
+1.5
+0.3
-0.3
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