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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS05710 and PFLU_RS05715 overlap by 4 nucleotides
PFLU_RS05715 and PFLU_RS05720 are separated by 156 nucleotides
PFLU_RS05720 and PFLU_RS05725 are separated by 141 nucleotides
PFLU_RS05725 and PFLU_RS05730 are separated by 625 nucleotides
PFLU_RS05710: PFLU_RS05710 - ribonuclease T, at 1,287,753 to 1,288,424
_RS05710
PFLU_RS05715: PFLU_RS05715 - dihydroorotase, at 1,288,421 to 1,289,467
_RS05715
PFLU_RS05720: PFLU_RS05720 - OmpA family protein, at 1,289,624 to 1,290,532
_RS05720
PFLU_RS05725: PFLU_RS05725 - argininosuccinate synthase, at 1,290,674 to 1,291,891
_RS05725
PFLU_RS05730: PFLU_RS05730 - response regulator transcription factor, at 1,292,517 to 1,293,149
_RS05730
Group
Condition
PFLU
_RS05710
PFLU
_RS05715
PFLU
_RS05720
PFLU
_RS05725
PFLU
_RS05730
carbon source
D-Glucose (C); with MOPS
N.D.
N.D.
+0.4
N.D.
-0.1
carbon source
L-Arabinose (C); with MOPS
N.D.
N.D.
+0.4
N.D.
-0.1
carbon source
D-Glucose (C); with MOPS
N.D.
N.D.
+0.4
N.D.
-0.1
carbon source
Trisodium citrate (C)
N.D.
N.D.
+0.4
N.D.
-0.1
carbon source
L-Arabinose (C)
N.D.
N.D.
-0.0
N.D.
+0.4
carbon source
succinate (C)
N.D.
N.D.
+0.3
N.D.
+0.1
carbon source
D-Xylose (C)
N.D.
N.D.
+0.3
N.D.
+0.1
carbon source
Trisodium citrate (C); with MOPS
N.D.
N.D.
+0.6
N.D.
-0.1
carbon source
D-Glucose (C); with MOPS
N.D.
N.D.
+0.5
N.D.
+0.0
carbon source
Trisodium citrate (C)
N.D.
N.D.
+0.6
N.D.
-0.0
carbon source
succinate (C)
N.D.
N.D.
+0.5
N.D.
+0.2
carbon source
Trisodium citrate (C); with MOPS
N.D.
N.D.
+0.7
N.D.
-0.1
carbon source
succinate (C); with MOPS
N.D.
N.D.
+0.5
N.D.
+0.1
carbon source
NAG (C)
N.D.
N.D.
+0.7
N.D.
-0.0
carbon source
NAG (C); with MOPS
N.D.
N.D.
+0.9
N.D.
-0.2
carbon source
D-Glucose (C)
N.D.
N.D.
+0.7
N.D.
+0.0
carbon source
L-Arabinose (C); with MOPS
N.D.
N.D.
+0.5
N.D.
+0.2
carbon source
Trisodium citrate (C)
N.D.
N.D.
+0.7
N.D.
-0.0
carbon source
L-Arabinose (C); with MOPS
N.D.
N.D.
+0.6
N.D.
+0.1
carbon source
succinate (C); with MOPS
N.D.
N.D.
+0.7
N.D.
+0.0
carbon source
succinate (C); with MOPS
N.D.
N.D.
+0.6
N.D.
+0.1
carbon source
D-Glucose (C)
N.D.
N.D.
+0.7
N.D.
+0.1
carbon source
D-Glucose (C)
N.D.
N.D.
+0.7
N.D.
+0.1
carbon source
NAG (C)
N.D.
N.D.
+0.7
N.D.
+0.2
carbon source
Trisodium citrate (C); with MOPS
N.D.
N.D.
+0.6
N.D.
+0.3
carbon source
NAG (C); with MOPS
N.D.
N.D.
+1.1
N.D.
-0.2
carbon source
NAG (C); with MOPS
N.D.
N.D.
+1.1
N.D.
-0.0
carbon source
acetate (C)
N.D.
N.D.
+1.1
N.D.
+0.1
carbon source
acetate (C)
N.D.
N.D.
+0.9
N.D.
+0.4
carbon source
acetate (C)
N.D.
N.D.
+1.0
N.D.
+0.3
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