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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS05665 and PFLU_RS05670 are separated by 328 nucleotides
PFLU_RS05670 and PFLU_RS05675 are separated by 135 nucleotides
PFLU_RS05675 and PFLU_RS05680 overlap by 4 nucleotides
PFLU_RS05680 and PFLU_RS30415 are separated by 120 nucleotides
PFLU_RS05665: PFLU_RS05665 - aquaporin, at 1,278,823 to 1,279,680
_RS05665
PFLU_RS05670: PFLU_RS05670 - Cys-tRNA(Pro) deacylase, at 1,280,009 to 1,280,479
_RS05670
PFLU_RS05675: PFLU_RS05675 - ABC transporter ATP-binding protein, at 1,280,615 to 1,281,724
_RS05675
PFLU_RS05680: PFLU_RS05680 - ornithine carbamoyltransferase, at 1,281,721 to 1,282,641
_RS05680
PFLU_RS30415: PFLU_RS30415 - hypothetical protein, at 1,282,762 to 1,283,000
_RS30415
Group
Condition
PFLU
_RS05665
PFLU
_RS05670
PFLU
_RS05675
PFLU
_RS05680
PFLU
_RS30415
carbon source
acetate (C)
-1.4
+0.0
-0.1
N.D.
-0.4
carbon source
acetate (C)
-1.6
-0.0
+0.0
N.D.
+0.0
carbon source
D-Xylose (C)
-0.5
+0.3
+0.0
N.D.
-1.1
carbon source
NAG (C)
-1.6
+0.3
+0.1
N.D.
-0.2
carbon source
D,L-Lactate (C)
-0.2
-0.0
-0.0
N.D.
-0.9
carbon source
acetate (C)
+1.0
-0.7
-0.2
N.D.
-1.1
carbon source
NAG (C)
-1.5
+0.2
+0.0
N.D.
+0.4
carbon source
L-Arabinose (C); with MOPS
-0.4
+0.1
+0.0
N.D.
-0.5
carbon source
L-Arabinose (C); with MOPS
-1.0
+0.5
-0.1
N.D.
-0.1
carbon source
NAG (C); with MOPS
+0.9
-0.3
-0.4
N.D.
-0.7
carbon source
acetate (C)
+1.2
-0.4
-0.2
N.D.
-1.1
carbon source
Trisodium citrate (C)
+0.5
-0.4
-0.1
N.D.
-0.2
carbon source
L-Arabinose (C)
-0.2
+0.3
+0.2
N.D.
-0.5
carbon source
Trisodium citrate (C); with MOPS
+0.5
-0.3
+0.1
N.D.
-0.4
carbon source
L-Arabinose (C); with MOPS
-0.2
-0.2
-0.2
N.D.
+0.4
carbon source
Trisodium citrate (C); with MOPS
+0.5
-0.2
-0.0
N.D.
-0.3
carbon source
NAG (C); with MOPS
+1.0
+0.0
-0.3
N.D.
-0.7
carbon source
D,L-Lactate (C)
-0.3
-0.0
+0.1
N.D.
+0.4
carbon source
NAG (C); with MOPS
+0.7
-0.1
-0.2
N.D.
-0.1
carbon source
Trisodium citrate (C)
+0.5
-0.1
-0.0
N.D.
+0.0
carbon source
succinate (C)
+0.3
+0.3
-0.0
N.D.
-0.1
carbon source
L-Arabinose (C)
-0.7
+0.4
+0.1
N.D.
+0.6
carbon source
Trisodium citrate (C)
+0.5
-0.2
-0.1
N.D.
+0.2
carbon source
L-Arabinose (C)
-1.1
+0.8
+0.2
N.D.
+0.6
carbon source
D-Glucose (C)
+0.5
+0.3
-0.1
N.D.
-0.1
carbon source
D-Glucose (C)
+0.5
-0.1
-0.0
N.D.
+0.2
carbon source
Trisodium citrate (C); with MOPS
+0.3
+0.1
-0.1
N.D.
+0.5
carbon source
succinate (C); with MOPS
+0.4
-0.1
+0.0
N.D.
+0.5
carbon source
D-Glucose (C)
+0.3
+0.0
+0.1
N.D.
+0.5
carbon source
acetate (C)
+1.2
-0.1
-0.4
N.D.
+1.2
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