Fitness for 5 genes in Pseudomonas fluorescens SBW25

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 38 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS05410 and PFLU_RS05415 are separated by 472 nucleotidesPFLU_RS05415 and PFLU_RS05420 are separated by 51 nucleotidesPFLU_RS05420 and PFLU_RS05425 are separated by 19 nucleotidesPFLU_RS05425 and PFLU_RS05430 overlap by 4 nucleotides PFLU_RS05410: PFLU_RS05410 - PadR family transcriptional regulator, at 1,207,648 to 1,208,169 _RS05410 PFLU_RS05415: PFLU_RS05415 - type 1 fimbrial protein, at 1,208,642 to 1,209,151 _RS05415 PFLU_RS05420: PFLU_RS05420 - type 1 fimbrial protein, at 1,209,203 to 1,209,757 _RS05420 PFLU_RS05425: PFLU_RS05425 - outer membrane usher protein, at 1,209,777 to 1,212,371 _RS05425 PFLU_RS05430: PFLU_RS05430 - fimbria/pilus periplasmic chaperone, at 1,212,368 to 1,213,129 _RS05430
Group Condition PFLU_RS05410 PFLU_RS05415 PFLU_RS05420 PFLU_RS05425 PFLU_RS05430
carbon source L-Arabinose (C) -0.2 -0.2 -0.6 -0.3 -0.3
carbon source L-Arabinose (C); with MOPS -0.0 -0.0 -0.7 +0.0 -0.1
carbon source succinate (C); with MOPS -0.2 -0.0 -0.2 -0.0 -0.0
carbon source D-Glucose (C) -0.5 -0.1 +0.3 -0.1 -0.1
carbon source L-Arabinose (C) -0.0 -0.0 -0.4 +0.0 -0.0
carbon source D-Glucose (C); with MOPS -0.3 +0.1 -0.2 +0.0 -0.1
carbon source Trisodium citrate (C) +0.1 -0.3 +0.0 -0.0 -0.1
carbon source D,L-Lactate (C) +0.1 +0.1 -0.4 -0.0 -0.1
carbon source L-Arabinose (C) -0.1 -0.2 +0.2 +0.0 -0.2
carbon source succinate (C); with MOPS +0.0 +0.0 -0.2 +0.0 -0.2
carbon source NAG (C); with MOPS -0.2 +0.0 +0.1 +0.1 -0.2
carbon source Trisodium citrate (C); with MOPS +0.2 -0.1 -0.0 -0.1 -0.1
carbon source NAG (C); with MOPS +0.2 +0.0 -0.2 +0.1 -0.2
carbon source succinate (C) -0.2 +0.2 +0.0 +0.0 -0.1
carbon source Trisodium citrate (C); with MOPS +0.1 +0.1 +0.0 -0.0 -0.2
carbon source Trisodium citrate (C) +0.1 -0.1 +0.1 +0.1 -0.2
carbon source D,L-Lactate (C) +0.4 +0.1 -0.3 -0.1 +0.0
carbon source D-Glucose (C); with MOPS +0.1 -0.0 +0.3 -0.0 -0.2
carbon source acetate (C) +0.6 -0.1 -0.2 +0.0 -0.2
carbon source D-Glucose (C) +0.2 -0.1 +0.2 -0.1 -0.0
carbon source succinate (C) +0.5 -0.0 -0.1 +0.1 -0.1
carbon source acetate (C) +0.5 -0.2 +0.0 -0.1 +0.1
carbon source acetate (C) +0.5 +0.3 -0.4 +0.0 -0.0
carbon source Trisodium citrate (C) +0.3 +0.0 +0.3 -0.0 -0.2
carbon source NAG (C) +0.3 +0.0 +0.2 +0.0 -0.1
carbon source acetate (C) +0.5 +0.1 +0.1 -0.1 -0.1
carbon source succinate (C) +0.8 -0.1 -0.2 +0.0 -0.0
carbon source succinate (C); with MOPS +0.3 +0.1 +0.2 +0.1 +0.0
carbon source Trisodium citrate (C); with MOPS +0.5 +0.1 +0.1 -0.0 +0.0
carbon source L-Arabinose (C); with MOPS +0.6 +0.0 +0.0 +0.1 -0.1
remove
PFLU_RS05410
plot		 remove
PFLU_RS05415
plot		 remove
PFLU_RS05420		 remove
PFLU_RS05425
plot		 remove
PFLU_RS05430
plot