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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS05400 and PFLU_RS05405 are separated by 1 nucleotides
PFLU_RS05405 and PFLU_RS05410 overlap by 4 nucleotides
PFLU_RS05410 and PFLU_RS05415 are separated by 472 nucleotides
PFLU_RS05415 and PFLU_RS05420 are separated by 51 nucleotides
PFLU_RS05400: PFLU_RS05400 - hypothetical protein, at 1,206,259 to 1,206,882
_RS05400
PFLU_RS05405: PFLU_RS05405 - siderophore-interacting protein, at 1,206,884 to 1,207,651
_RS05405
PFLU_RS05410: PFLU_RS05410 - PadR family transcriptional regulator, at 1,207,648 to 1,208,169
_RS05410
PFLU_RS05415: PFLU_RS05415 - type 1 fimbrial protein, at 1,208,642 to 1,209,151
_RS05415
PFLU_RS05420: PFLU_RS05420 - type 1 fimbrial protein, at 1,209,203 to 1,209,757
_RS05420
Group
Condition
PFLU
_RS05400
PFLU
_RS05405
PFLU
_RS05410
PFLU
_RS05415
PFLU
_RS05420
carbon source
L-Arabinose (C)
-0.0
-0.1
-0.2
-0.2
-0.6
carbon source
L-Arabinose (C); with MOPS
+0.2
-0.4
-0.0
-0.0
-0.7
carbon source
L-Arabinose (C)
+0.1
-0.1
-0.0
-0.0
-0.4
carbon source
Trisodium citrate (C)
-0.1
-0.1
+0.1
-0.3
+0.0
carbon source
D-Glucose (C)
+0.1
-0.1
-0.5
-0.1
+0.3
carbon source
D,L-Lactate (C)
-0.1
+0.2
+0.1
+0.1
-0.4
carbon source
D,L-Lactate (C)
-0.1
-0.2
+0.4
+0.1
-0.3
carbon source
D-Xylose (C)
-0.1
+0.1
-0.2
-0.0
+0.1
carbon source
succinate (C)
-0.1
+0.1
-0.2
+0.2
+0.0
carbon source
D-Glucose (C); with MOPS
+0.1
+0.3
-0.3
+0.1
-0.2
carbon source
NAG (C); with MOPS
-0.1
-0.0
+0.1
-0.1
+0.2
carbon source
D-Glucose (C)
+0.0
-0.4
+0.2
-0.1
+0.2
carbon source
L-Arabinose (C)
+0.2
+0.0
-0.1
-0.2
+0.2
carbon source
D-Xylose (C)
-0.2
+0.2
-0.1
+0.1
+0.1
carbon source
succinate (C)
-0.3
-0.1
+0.8
-0.1
-0.2
carbon source
NAG (C)
+0.0
+0.3
+0.1
+0.0
-0.2
carbon source
NAG (C); with MOPS
+0.1
+0.4
-0.2
+0.0
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.2
+0.2
-0.1
-0.0
carbon source
acetate (C)
-0.3
+0.2
+0.5
+0.3
-0.4
carbon source
NAG (C); with MOPS
+0.1
+0.2
+0.2
+0.0
-0.2
carbon source
succinate (C)
-0.0
+0.1
+0.5
-0.0
-0.1
carbon source
acetate (C)
+0.3
-0.1
+0.6
-0.1
-0.2
carbon source
L-Arabinose (C); with MOPS
+0.1
-0.1
+0.6
+0.0
+0.0
carbon source
Trisodium citrate (C); with MOPS
-0.0
+0.1
+0.5
+0.1
+0.1
carbon source
acetate (C)
-0.1
+0.1
+0.5
+0.1
+0.1
carbon source
NAG (C)
-0.0
+0.3
+0.3
+0.0
+0.2
carbon source
Trisodium citrate (C)
+0.1
+0.1
+0.3
+0.0
+0.3
carbon source
acetate (C)
+0.3
+0.1
+0.5
-0.2
+0.0
carbon source
succinate (C); with MOPS
+0.3
+0.1
+0.3
+0.1
+0.2
carbon source
D-Glucose (C); with MOPS
+0.3
+0.4
+0.1
-0.0
+0.3
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