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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS05270 and PFLU_RS05275 are separated by 52 nucleotides
PFLU_RS05275 and PFLU_RS05280 are separated by 259 nucleotides
PFLU_RS05280 and PFLU_RS05285 overlap by 1 nucleotides
PFLU_RS05285 and PFLU_RS05290 are separated by 80 nucleotides
PFLU_RS05270: PFLU_RS05270 - DNA repair protein RecO, at 1,175,039 to 1,175,728
_RS05270
PFLU_RS05275: PFLU_RS05275 - pyridoxine 5'-phosphate synthase, at 1,175,781 to 1,176,524
_RS05275
PFLU_RS05280: PFLU_RS05280 - multicopper oxidase family protein, at 1,176,784 to 1,178,160
_RS05280
PFLU_RS05285: PFLU_RS05285 - tRNA adenosine(34) deaminase TadA, at 1,178,160 to 1,178,657
_RS05285
PFLU_RS05290: PFLU_RS05290 - tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB, at 1,178,738 to 1,179,694
_RS05290
Group
Condition
PFLU
_RS05270
PFLU
_RS05275
PFLU
_RS05280
PFLU
_RS05285
PFLU
_RS05290
carbon source
L-Arabinose (C); with MOPS
-0.9
N.D.
-0.2
N.D.
+0.0
carbon source
succinate (C); with MOPS
-0.7
N.D.
-0.2
N.D.
-0.1
carbon source
L-Arabinose (C); with MOPS
-0.5
N.D.
-0.1
N.D.
-0.3
carbon source
Trisodium citrate (C); with MOPS
-0.3
N.D.
-0.2
N.D.
-0.2
carbon source
Trisodium citrate (C)
-0.0
N.D.
-0.5
N.D.
-0.2
carbon source
D-Glucose (C)
-0.6
N.D.
-0.0
N.D.
-0.1
carbon source
L-Arabinose (C)
-0.3
N.D.
-0.1
N.D.
-0.3
carbon source
NAG (C); with MOPS
-0.4
N.D.
-0.2
N.D.
-0.0
carbon source
Trisodium citrate (C); with MOPS
-0.3
N.D.
-0.2
N.D.
-0.1
carbon source
D,L-Lactate (C)
-0.5
N.D.
-0.2
N.D.
+0.0
carbon source
succinate (C); with MOPS
-0.4
N.D.
-0.2
N.D.
+0.0
carbon source
L-Arabinose (C); with MOPS
-0.3
N.D.
-0.3
N.D.
+0.0
carbon source
D-Glucose (C); with MOPS
-0.3
N.D.
-0.3
N.D.
+0.0
carbon source
D-Glucose (C)
-0.1
N.D.
-0.4
N.D.
+0.0
carbon source
Trisodium citrate (C)
-0.2
N.D.
-0.2
N.D.
-0.1
carbon source
NAG (C)
-0.4
N.D.
+0.0
N.D.
-0.1
carbon source
D-Glucose (C); with MOPS
-0.3
N.D.
-0.1
N.D.
+0.0
carbon source
NAG (C); with MOPS
+0.2
N.D.
-0.3
N.D.
-0.3
carbon source
D-Glucose (C); with MOPS
-0.4
N.D.
-0.2
N.D.
+0.2
carbon source
succinate (C); with MOPS
-0.3
N.D.
-0.2
N.D.
+0.1
carbon source
D-Xylose (C)
-0.6
N.D.
+0.1
N.D.
+0.2
carbon source
acetate (C)
-0.1
N.D.
-0.3
N.D.
+0.0
carbon source
succinate (C)
-0.3
N.D.
-0.1
N.D.
+0.1
carbon source
succinate (C)
-0.2
N.D.
-0.1
N.D.
+0.1
carbon source
D,L-Lactate (C)
-0.1
N.D.
-0.2
N.D.
+0.1
carbon source
succinate (C)
+0.1
N.D.
-0.1
N.D.
-0.2
carbon source
NAG (C)
-0.2
N.D.
+0.1
N.D.
+0.1
carbon source
Trisodium citrate (C)
+0.1
N.D.
-0.2
N.D.
+0.1
carbon source
L-Arabinose (C)
+0.6
N.D.
-0.1
N.D.
-0.4
carbon source
L-Arabinose (C)
+0.5
N.D.
-0.1
N.D.
-0.1
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