Fitness for 5 genes in Pseudomonas fluorescens SBW25

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 38 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS05150 and PFLU_RS05155 are separated by 107 nucleotidesPFLU_RS05155 and PFLU_RS05160 are separated by 104 nucleotidesPFLU_RS05160 and PFLU_RS05165 are separated by 91 nucleotidesPFLU_RS05165 and PFLU_RS05170 overlap by 4 nucleotides PFLU_RS05150: PFLU_RS05150 - MFS transporter, at 1,148,150 to 1,149,664 _RS05150 PFLU_RS05155: PFLU_RS05155 - LysR family transcriptional regulator, at 1,149,772 to 1,150,683 _RS05155 PFLU_RS05160: PFLU_RS05160 - TonB-dependent receptor family protein, at 1,150,788 to 1,153,124 _RS05160 PFLU_RS05165: PFLU_RS05165 - FecR family protein, at 1,153,216 to 1,154,157 _RS05165 PFLU_RS05170: PFLU_RS05170 - sigma-70 family RNA polymerase sigma factor, at 1,154,154 to 1,154,642 _RS05170
Group Condition PFLU_RS05150 PFLU_RS05155 PFLU_RS05160 PFLU_RS05165 PFLU_RS05170
carbon source acetate (C) +0.1 -0.8 +0.0 -0.1 -0.6
carbon source Trisodium citrate (C) +0.0 -0.0 -0.4 +0.0 -0.6
carbon source Trisodium citrate (C); with MOPS -0.0 -0.1 -0.1 -0.1 -0.5
carbon source Trisodium citrate (C); with MOPS +0.0 -0.2 -0.2 -0.0 -0.3
carbon source succinate (C); with MOPS +0.1 +0.3 -0.2 -0.1 -0.5
carbon source Trisodium citrate (C) +0.2 -0.2 -0.3 -0.1 +0.1
carbon source NAG (C) -0.1 -0.1 +0.0 -0.1 -0.0
carbon source succinate (C); with MOPS +0.0 -0.0 -0.1 -0.2 +0.1
carbon source acetate (C) +0.3 -0.1 +0.2 -0.1 -0.5
carbon source Trisodium citrate (C) +0.0 +0.2 -0.3 -0.1 -0.0
carbon source D-Glucose (C); with MOPS +0.2 +0.1 +0.0 -0.0 -0.4
carbon source NAG (C); with MOPS -0.2 +0.1 -0.1 -0.1 +0.2
carbon source D-Xylose (C) +0.1 -0.0 +0.0 +0.1 -0.2
carbon source D-Glucose (C); with MOPS +0.2 -0.0 -0.1 +0.0 -0.2
carbon source D-Glucose (C); with MOPS +0.2 -0.1 -0.1 -0.1 +0.1
carbon source succinate (C) -0.1 +0.3 +0.1 -0.2 -0.1
carbon source NAG (C); with MOPS -0.1 -0.2 +0.1 +0.1 +0.2
carbon source L-Arabinose (C) -0.1 -0.1 +0.1 +0.0 +0.1
carbon source NAG (C); with MOPS +0.3 -0.2 -0.1 -0.4 +0.5
carbon source L-Arabinose (C); with MOPS +0.2 -0.0 -0.0 +0.1 -0.2
carbon source D,L-Lactate (C) +0.0 -0.1 +0.1 -0.0 +0.2
carbon source succinate (C); with MOPS +0.0 +0.3 +0.0 -0.1 -0.1
carbon source succinate (C) -0.0 -0.0 -0.0 -0.0 +0.3
carbon source acetate (C) +0.0 +0.1 +0.0 +0.0 +0.2
carbon source D-Glucose (C) -0.1 -0.2 +0.2 +0.2 +0.4
carbon source L-Arabinose (C) +0.1 +0.1 +0.1 -0.1 +0.2
carbon source L-Arabinose (C) -0.1 +0.2 +0.1 -0.0 +0.4
carbon source D-Glucose (C) +0.0 +0.2 +0.1 -0.1 +0.4
carbon source L-Arabinose (C); with MOPS +0.0 +0.1 +0.2 +0.2 +0.2
carbon source L-Arabinose (C); with MOPS +0.0 +0.1 +0.2 -0.2 +0.6
remove
PFLU_RS05150
plot		 remove
PFLU_RS05155
plot		 remove
PFLU_RS05160		 remove
PFLU_RS05165
plot		 remove
PFLU_RS05170
plot