Fitness for 5 genes in Pseudomonas fluorescens SBW25

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 38 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS04875 and PFLU_RS04880 are separated by 155 nucleotidesPFLU_RS04880 and PFLU_RS04885 are separated by 8 nucleotidesPFLU_RS04885 and PFLU_RS04890 are separated by 11 nucleotidesPFLU_RS04890 and PFLU_RS04895 overlap by 1 nucleotides PFLU_RS04875: PFLU_RS04875 - MBOAT family protein, at 1,088,895 to 1,090,427 _RS04875 PFLU_RS04880: PFLU_RS04880 - mannuronate-specific alginate lyase, at 1,090,583 to 1,091,692 _RS04880 PFLU_RS04885: PFLU_RS04885 - alginate O-acetyltransferase, at 1,091,701 to 1,093,149 _RS04885 PFLU_RS04890: PFLU_RS04890 - right-handed parallel beta-helix repeat-containing protein, at 1,093,161 to 1,094,750 _RS04890 PFLU_RS04895: PFLU_RS04895 - alginate biosynthesis protein AlgE, at 1,094,750 to 1,096,237 _RS04895
Group Condition PFLU_RS04875 PFLU_RS04880 PFLU_RS04885 PFLU_RS04890 PFLU_RS04895
carbon source L-Arabinose (C) -0.3 -0.3 -0.2 -0.4 +0.2
carbon source Trisodium citrate (C); with MOPS -0.2 -0.2 -0.3 -0.2 -0.0
carbon source Trisodium citrate (C) -0.0 -0.3 -0.1 +0.0 -0.3
carbon source D,L-Lactate (C) -0.1 -0.1 -0.1 -0.1 -0.3
carbon source L-Arabinose (C); with MOPS -0.1 -0.4 -0.1 +0.1 -0.1
carbon source L-Arabinose (C); with MOPS -0.2 -0.1 -0.2 +0.1 -0.3
carbon source D-Glucose (C); with MOPS -0.0 -0.3 +0.1 +0.0 -0.3
carbon source NAG (C); with MOPS +0.2 -0.3 -0.2 -0.1 -0.1
carbon source Trisodium citrate (C); with MOPS +0.0 -0.2 -0.2 -0.1 +0.0
carbon source acetate (C) -0.1 -0.0 -0.1 -0.2 +0.1
carbon source D-Glucose (C); with MOPS -0.1 -0.2 -0.2 -0.1 +0.2
carbon source succinate (C); with MOPS -0.1 -0.0 -0.1 -0.2 +0.0
carbon source L-Arabinose (C) +0.1 -0.3 -0.1 -0.0 -0.1
carbon source succinate (C); with MOPS +0.1 -0.3 -0.0 -0.1 +0.1
carbon source succinate (C); with MOPS -0.0 +0.2 -0.3 -0.1 +0.0
carbon source NAG (C); with MOPS -0.1 -0.1 +0.1 -0.1 -0.1
carbon source acetate (C) -0.2 +0.2 -0.1 +0.1 -0.3
carbon source acetate (C) +0.3 -0.3 -0.0 -0.3 +0.1
carbon source Trisodium citrate (C) -0.1 -0.1 +0.0 -0.1 +0.1
carbon source D-Xylose (C) +0.1 -0.0 -0.1 +0.1 -0.2
carbon source succinate (C) +0.2 -0.0 -0.2 -0.1 -0.1
carbon source D-Glucose (C) +0.1 -0.2 -0.1 -0.2 +0.2
carbon source D-Glucose (C) +0.1 +0.2 -0.1 -0.1 -0.1
carbon source L-Arabinose (C) -0.1 +0.2 -0.2 +0.2 -0.3
carbon source D-Glucose (C) +0.1 -0.2 +0.1 -0.1 +0.1
carbon source NAG (C) +0.1 +0.2 -0.0 +0.2 -0.2
carbon source D-Xylose (C) +0.2 +0.1 -0.0 +0.1 -0.0
carbon source NAG (C) +0.0 -0.0 +0.1 +0.2 +0.1
carbon source D,L-Lactate (C) -0.0 +0.2 +0.1 +0.2 -0.0
carbon source L-Arabinose (C); with MOPS -0.1 +0.3 +0.3 -0.2 +0.1
remove
PFLU_RS04875
plot		 remove
PFLU_RS04880
plot		 remove
PFLU_RS04885		 remove
PFLU_RS04890
plot		 remove
PFLU_RS04895
plot