Fitness for 5 genes in Pseudomonas fluorescens SBW25

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 38 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS04785 and PFLU_RS04790 are separated by 34 nucleotidesPFLU_RS04790 and PFLU_RS04795 are separated by 108 nucleotidesPFLU_RS04795 and PFLU_RS04800 are separated by 3 nucleotidesPFLU_RS04800 and PFLU_RS04805 are separated by 208 nucleotides PFLU_RS04785: PFLU_RS04785 - ABC transporter substrate-binding protein, at 1,071,526 to 1,072,296 _RS04785 PFLU_RS04790: PFLU_RS04790 - YkgJ family cysteine cluster protein, at 1,072,331 to 1,073,074 _RS04790 PFLU_RS04795: PFLU_RS04795 - GNAT family N-acetyltransferase, at 1,073,183 to 1,073,665 _RS04795 PFLU_RS04800: PFLU_RS04800 - chemotaxis protein CheV, at 1,073,669 to 1,074,571 _RS04800 PFLU_RS04805: PFLU_RS04805 - D-glycerate dehydrogenase, at 1,074,780 to 1,075,754 _RS04805
Group Condition PFLU_RS04785 PFLU_RS04790 PFLU_RS04795 PFLU_RS04800 PFLU_RS04805
carbon source Trisodium citrate (C); with MOPS -0.2 -0.1 -0.2 -0.0 -0.1
carbon source acetate (C) -0.4 +0.1 -0.2 -0.1 -0.1
carbon source succinate (C) -0.0 -0.2 -0.2 +0.1 -0.2
carbon source D-Xylose (C) -0.5 +0.2 -0.2 -0.1 +0.4
carbon source acetate (C) +0.0 +0.1 -0.2 -0.1 -0.1
carbon source succinate (C) +0.3 +0.0 -0.5 +0.1 -0.1
carbon source succinate (C); with MOPS -0.2 +0.0 -0.0 -0.2 +0.3
carbon source D-Glucose (C); with MOPS +0.2 -0.1 -0.1 -0.2 +0.1
carbon source Trisodium citrate (C); with MOPS +0.2 +0.1 -0.1 -0.1 -0.2
carbon source acetate (C) -0.2 +0.1 -0.0 -0.1 +0.2
carbon source L-Arabinose (C) -0.2 -0.2 +0.1 +0.1 +0.2
carbon source Trisodium citrate (C) -0.1 +0.1 -0.1 +0.1 +0.0
carbon source L-Arabinose (C); with MOPS -0.3 +0.2 +0.2 -0.0 -0.0
carbon source succinate (C); with MOPS -0.2 +0.3 -0.0 +0.0 +0.0
carbon source D-Xylose (C) +0.1 +0.3 +0.0 -0.2 -0.1
carbon source D,L-Lactate (C) +0.0 +0.1 +0.2 -0.2 +0.1
carbon source D-Glucose (C) -0.0 +0.3 +0.2 -0.3 +0.0
carbon source NAG (C) +0.3 +0.1 -0.1 -0.2 +0.1
carbon source D-Glucose (C); with MOPS +0.1 +0.1 +0.3 +0.1 -0.2
carbon source NAG (C); with MOPS -0.2 +0.2 -0.0 +0.1 +0.3
carbon source Trisodium citrate (C) +0.3 +0.1 +0.1 -0.2 +0.1
carbon source D-Glucose (C) +0.3 +0.3 +0.3 -0.1 -0.4
carbon source L-Arabinose (C) +0.4 +0.1 -0.3 +0.5 -0.2
carbon source Trisodium citrate (C) +0.5 +0.2 +0.0 +0.2 -0.3
carbon source NAG (C); with MOPS +0.1 +0.2 +0.1 -0.1 +0.3
carbon source NAG (C); with MOPS +0.3 +0.1 +0.3 -0.1 +0.2
carbon source Trisodium citrate (C); with MOPS +0.1 +0.0 +0.3 +0.2 +0.1
carbon source acetate (C) +0.6 -0.2 +0.3 +0.1 -0.1
carbon source acetate (C) +0.9 +0.3 +0.0 -0.3 +0.0
carbon source L-Arabinose (C); with MOPS +0.2 +0.3 +0.6 -0.1 -0.0
remove
PFLU_RS04785
plot
remove
PFLU_RS04790
plot
remove
PFLU_RS04795
remove
PFLU_RS04800
plot
remove
PFLU_RS04805
plot