Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS04480 and PFLU_RS04485 are separated by 2 nucleotides
PFLU_RS04485 and PFLU_RS04490 are separated by 164 nucleotides
PFLU_RS04490 and PFLU_RS04495 are separated by 3 nucleotides
PFLU_RS04495 and PFLU_RS04500 are separated by 35 nucleotides
PFLU_RS04480: PFLU_RS04480 - uracil-xanthine permease, at 1,005,039 to 1,006,313
_RS04480
PFLU_RS04485: PFLU_RS04485 - uracil phosphoribosyltransferase, at 1,006,316 to 1,006,954
_RS04485
PFLU_RS04490: PFLU_RS04490 - hypoxanthine-guanine phosphoribosyltransferase, at 1,007,119 to 1,007,676
_RS04490
PFLU_RS04495: PFLU_RS04495 - WbuC family cupin fold metalloprotein, at 1,007,680 to 1,008,147
_RS04495
PFLU_RS04500: PFLU_RS04500 - hypothetical protein, at 1,008,183 to 1,008,668
_RS04500
Group
Condition
PFLU
_RS04480
PFLU
_RS04485
PFLU
_RS04490
PFLU
_RS04495
PFLU
_RS04500
carbon source
succinate (C); with MOPS
+0.1
+0.2
-0.2
+0.1
-0.1
carbon source
succinate (C)
-0.1
+0.1
+0.3
-0.0
-0.0
carbon source
NAG (C)
+0.2
+0.3
-0.0
-0.1
-0.1
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.4
-0.2
+0.0
-0.1
carbon source
D-Glucose (C); with MOPS
-0.0
+0.2
-0.2
+0.1
+0.1
carbon source
succinate (C)
+0.1
+0.1
+0.3
-0.1
-0.1
carbon source
succinate (C); with MOPS
+0.0
+0.4
+0.1
-0.0
-0.1
carbon source
D-Glucose (C)
-0.1
+0.2
+0.4
-0.0
+0.0
carbon source
D-Glucose (C)
+0.1
+0.4
+0.1
-0.1
-0.1
carbon source
succinate (C)
-0.2
+0.3
+0.4
-0.0
-0.0
carbon source
D-Glucose (C); with MOPS
+0.2
+0.3
+0.4
-0.1
-0.2
carbon source
Trisodium citrate (C)
+0.4
+0.3
+0.0
-0.0
+0.1
carbon source
D-Glucose (C)
-0.0
+0.5
+0.4
-0.1
+0.0
carbon source
Trisodium citrate (C)
+0.2
+0.5
+0.3
-0.1
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.4
+0.6
+0.1
-0.1
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.5
+0.5
+0.0
-0.0
carbon source
acetate (C)
+0.1
+0.7
+0.3
+0.1
-0.2
carbon source
Trisodium citrate (C)
+0.3
+0.6
+0.6
-0.2
-0.2
carbon source
NAG (C); with MOPS
+0.2
+0.5
+0.6
-0.1
-0.0
carbon source
D-Glucose (C); with MOPS
+0.2
+0.4
+0.5
+0.1
+0.0
carbon source
NAG (C); with MOPS
+0.3
+0.7
+0.5
-0.1
+0.0
carbon source
NAG (C); with MOPS
+0.2
+0.6
+0.6
+0.0
+0.0
carbon source
acetate (C)
+0.3
+0.8
+0.9
-0.0
-0.3
carbon source
L-Arabinose (C); with MOPS
+0.5
+1.2
+0.4
-0.1
-0.0
carbon source
L-Arabinose (C); with MOPS
+0.6
+1.3
+0.8
-0.3
-0.1
carbon source
L-Arabinose (C); with MOPS
+0.9
+1.4
+0.2
-0.0
+0.0
carbon source
acetate (C)
+0.4
+0.9
+1.1
+0.3
-0.2
carbon source
L-Arabinose (C)
+0.8
+1.3
+0.8
-0.1
+0.1
carbon source
L-Arabinose (C)
+0.9
+1.5
+0.6
+0.2
-0.1
carbon source
L-Arabinose (C)
+0.9
+1.6
+0.9
+0.2
-0.0
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