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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS03970 and PFLU_RS03975 are separated by 246 nucleotides
PFLU_RS03975 and PFLU_RS03980 are separated by 61 nucleotides
PFLU_RS03980 and PFLU_RS03985 overlap by 4 nucleotides
PFLU_RS03985 and PFLU_RS03990 are separated by 230 nucleotides
PFLU_RS03970: PFLU_RS03970 - carboxylating nicotinate-nucleotide diphosphorylase, at 895,539 to 896,387
_RS03970
PFLU_RS03975: PFLU_RS03975 - DUF1631 domain-containing protein, at 896,634 to 898,784
_RS03975
PFLU_RS03980: PFLU_RS03980 - 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD, at 898,846 to 899,409
_RS03980
PFLU_RS03985: PFLU_RS03985 - membrane protein, at 899,406 to 900,242
_RS03985
PFLU_RS03990: PFLU_RS03990 - methyl-accepting chemotaxis protein, at 900,473 to 902,503
_RS03990
Group
Condition
PFLU
_RS03970
PFLU
_RS03975
PFLU
_RS03980
PFLU
_RS03985
PFLU
_RS03990
carbon source
NAG (C); with MOPS
-5.5
+0.1
-3.8
-0.3
+0.3
carbon source
acetate (C)
-5.5
-0.1
-2.8
+0.2
+0.2
carbon source
NAG (C); with MOPS
-3.2
+0.1
-3.8
-0.6
-0.0
carbon source
acetate (C)
-4.4
+0.3
-3.8
+0.5
-0.0
carbon source
L-Arabinose (C); with MOPS
-3.2
+0.2
-4.0
-0.3
+0.0
carbon source
acetate (C)
-4.3
+0.0
-2.4
-0.4
+0.0
carbon source
NAG (C); with MOPS
-3.5
+0.1
-3.9
+0.3
+0.2
carbon source
L-Arabinose (C)
-3.1
+0.2
-3.3
-0.2
-0.2
carbon source
L-Arabinose (C)
-3.1
-0.1
-3.2
+0.0
+0.0
carbon source
L-Arabinose (C); with MOPS
-2.0
+0.0
-3.9
-0.1
-0.1
carbon source
L-Arabinose (C); with MOPS
-2.3
+0.1
-3.6
+0.2
+0.1
carbon source
L-Arabinose (C)
-3.4
-0.3
-1.8
-0.1
+0.2
carbon source
Trisodium citrate (C)
-3.7
-0.1
-0.8
+0.2
-0.0
carbon source
Trisodium citrate (C)
-3.4
+0.0
-0.7
-0.4
-0.0
carbon source
D-Glucose (C)
-2.2
+0.0
-2.3
+0.2
-0.1
carbon source
Trisodium citrate (C)
-3.5
+0.0
-0.4
-0.3
+0.1
carbon source
D-Glucose (C)
-2.3
+0.1
-1.5
-0.1
-0.0
carbon source
D-Glucose (C)
-1.9
+0.1
-1.6
+0.1
-0.0
carbon source
D-Glucose (C); with MOPS
-2.0
+0.1
-1.4
+0.0
+0.1
carbon source
Trisodium citrate (C); with MOPS
-2.8
-0.2
-0.4
+0.4
+0.0
carbon source
D-Glucose (C); with MOPS
-2.5
+0.0
-0.5
-0.0
+0.0
carbon source
NAG (C)
-2.4
-0.1
-0.3
-0.1
+0.0
carbon source
D-Glucose (C); with MOPS
-2.5
+0.1
-0.3
+0.1
-0.0
carbon source
Trisodium citrate (C); with MOPS
-1.8
+0.2
-0.6
-0.4
-0.0
carbon source
NAG (C)
-2.2
-0.0
-0.4
-0.0
+0.1
carbon source
succinate (C); with MOPS
-1.8
-0.0
-0.5
-0.2
+0.0
carbon source
succinate (C)
-1.6
-0.0
-0.4
-0.4
+0.0
carbon source
Trisodium citrate (C); with MOPS
-2.0
+0.1
-0.4
+0.2
-0.0
carbon source
succinate (C)
-1.8
+0.1
-0.6
+0.2
-0.0
carbon source
succinate (C); with MOPS
-1.7
+0.2
-0.5
+0.1
+0.1
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