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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS03455 and PFLU_RS03460 are separated by 109 nucleotides
PFLU_RS03460 and PFLU_RS03465 are separated by 18 nucleotides
PFLU_RS03465 and PFLU_RS03470 are separated by 18 nucleotides
PFLU_RS03470 and PFLU_RS03475 overlap by 86 nucleotides
PFLU_RS03455: PFLU_RS03455 - cation transporter, at 795,624 to 796,529
_RS03455
PFLU_RS03460: PFLU_RS03460 - TolC family protein, at 796,639 to 797,862
_RS03460
PFLU_RS03465: PFLU_RS03465 - efflux RND transporter periplasmic adaptor subunit, at 797,881 to 798,987
_RS03465
PFLU_RS03470: PFLU_RS03470 - CusA/CzcA family heavy metal efflux RND transporter, at 799,006 to 802,152
_RS03470
PFLU_RS03475: PFLU_RS03475 - heavy metal sensor histidine kinase, at 802,067 to 803,503
_RS03475
Group
Condition
PFLU
_RS03455
PFLU
_RS03460
PFLU
_RS03465
PFLU
_RS03470
PFLU
_RS03475
carbon source
D,L-Lactate (C)
-0.1
-0.3
-0.1
-0.1
-0.1
carbon source
acetate (C)
-0.2
+0.1
-0.1
+0.0
-0.1
carbon source
L-Arabinose (C); with MOPS
-0.1
-0.0
+0.1
-0.1
-0.2
carbon source
D-Xylose (C)
-0.1
+0.0
+0.1
-0.0
-0.3
carbon source
acetate (C)
-0.1
+0.4
-0.6
-0.0
+0.1
carbon source
succinate (C)
-0.2
+0.1
-0.1
+0.0
+0.0
carbon source
acetate (C)
-0.2
+0.2
-0.3
+0.2
-0.0
carbon source
L-Arabinose (C)
-0.1
-0.2
-0.2
+0.2
+0.2
carbon source
L-Arabinose (C)
-0.1
-0.0
-0.2
+0.4
-0.0
carbon source
D-Xylose (C)
+0.0
+0.1
-0.2
+0.0
+0.2
carbon source
D-Glucose (C)
+0.2
-0.2
+0.3
+0.1
-0.2
carbon source
Trisodium citrate (C); with MOPS
-0.2
+0.2
-0.1
+0.2
+0.1
carbon source
L-Arabinose (C); with MOPS
-0.0
+0.1
-0.0
+0.1
+0.1
carbon source
D-Glucose (C); with MOPS
+0.1
+0.2
-0.1
-0.0
+0.1
carbon source
NAG (C); with MOPS
-0.0
+0.4
-0.1
-0.0
+0.1
carbon source
D-Glucose (C)
-0.1
-0.1
+0.3
+0.4
-0.2
carbon source
Trisodium citrate (C)
-0.3
+0.1
+0.1
+0.2
+0.2
carbon source
succinate (C)
+0.0
+0.1
+0.1
-0.1
+0.2
carbon source
Trisodium citrate (C)
+0.2
+0.1
-0.0
+0.2
-0.0
carbon source
D-Glucose (C)
+0.1
+0.2
+0.1
+0.1
-0.1
carbon source
L-Arabinose (C)
+0.1
+0.1
-0.2
+0.4
+0.1
carbon source
Trisodium citrate (C)
-0.0
+0.2
-0.1
+0.3
+0.1
carbon source
succinate (C); with MOPS
-0.1
+0.1
+0.2
+0.3
+0.1
carbon source
succinate (C); with MOPS
-0.1
+0.1
+0.2
+0.2
+0.2
carbon source
NAG (C); with MOPS
+0.2
-0.0
+0.3
+0.1
+0.1
carbon source
acetate (C)
+0.3
-0.1
+0.2
+0.3
+0.2
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.4
+0.1
+0.3
-0.1
carbon source
D-Glucose (C); with MOPS
+0.2
+0.2
+0.3
+0.1
+0.1
carbon source
D-Glucose (C); with MOPS
+0.2
+0.1
+0.2
+0.2
+0.3
carbon source
NAG (C); with MOPS
+0.1
+0.3
+0.2
+0.2
+0.3
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