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Protein
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Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS03300 and PFLU_RS03305 are separated by 49 nucleotides
PFLU_RS03305 and PFLU_RS03310 are separated by 12 nucleotides
PFLU_RS03310 and PFLU_RS03315 are separated by 87 nucleotides
PFLU_RS03315 and PFLU_RS03320 are separated by 88 nucleotides
PFLU_RS03300: PFLU_RS03300 - SDR family oxidoreductase, at 760,415 to 761,101
_RS03300
PFLU_RS03305: PFLU_RS03305 - YigZ family protein, at 761,151 to 761,732
_RS03305
PFLU_RS03310: PFLU_RS03310 - TetR/AcrR family transcriptional regulator, at 761,745 to 762,404
_RS03310
PFLU_RS03315: PFLU_RS03315 - purine permease, at 762,492 to 763,886
_RS03315
PFLU_RS03320: PFLU_RS03320 - LysR family transcriptional regulator, at 763,975 to 764,895
_RS03320
Group
Condition
PFLU
_RS03300
PFLU
_RS03305
PFLU
_RS03310
PFLU
_RS03315
PFLU
_RS03320
carbon source
NAG (C); with MOPS
-0.8
-0.1
+0.2
+0.0
-0.2
carbon source
acetate (C)
-0.5
-0.4
+0.4
-0.1
-0.1
carbon source
D,L-Lactate (C)
-0.1
-0.2
+0.1
-0.1
-0.2
carbon source
Trisodium citrate (C)
-0.2
+0.2
-0.0
-0.1
-0.2
carbon source
NAG (C)
-0.2
+0.2
-0.1
-0.1
+0.0
carbon source
D-Glucose (C); with MOPS
-0.5
+0.2
+0.2
-0.0
-0.0
carbon source
D-Glucose (C)
-0.5
+0.2
+0.3
-0.1
-0.0
carbon source
L-Arabinose (C)
+0.2
-0.7
+0.5
+0.0
-0.1
carbon source
succinate (C); with MOPS
+0.4
-0.3
+0.0
-0.1
-0.1
carbon source
acetate (C)
-0.3
+0.2
+0.0
-0.0
+0.0
carbon source
L-Arabinose (C)
+0.1
-0.3
+0.3
+0.0
+0.0
carbon source
D-Glucose (C); with MOPS
+0.4
-0.4
+0.3
-0.1
-0.0
carbon source
Trisodium citrate (C); with MOPS
-0.1
+0.3
+0.2
-0.1
-0.1
carbon source
acetate (C)
-0.2
+0.1
+0.2
+0.0
+0.2
carbon source
acetate (C)
-0.5
+0.6
+0.4
+0.1
-0.2
carbon source
D-Glucose (C); with MOPS
+0.4
-0.3
+0.2
+0.0
-0.0
carbon source
Trisodium citrate (C)
-0.1
+0.1
+0.3
-0.1
-0.1
carbon source
succinate (C)
+0.1
+0.2
+0.2
-0.2
-0.0
carbon source
L-Arabinose (C); with MOPS
-0.2
+0.2
+0.4
-0.0
+0.0
carbon source
Trisodium citrate (C)
-0.3
+0.4
+0.3
+0.0
-0.0
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.4
+0.0
+0.0
-0.2
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.4
+0.1
-0.1
+0.0
carbon source
NAG (C); with MOPS
+0.3
+0.3
-0.1
+0.0
+0.1
carbon source
D-Glucose (C)
+0.1
+0.2
+0.3
+0.0
+0.1
carbon source
succinate (C); with MOPS
+0.2
+0.5
+0.2
-0.1
-0.0
carbon source
L-Arabinose (C); with MOPS
-0.3
+0.7
+0.3
+0.0
+0.0
carbon source
succinate (C)
+0.5
+0.1
+0.3
+0.1
-0.0
carbon source
L-Arabinose (C)
+0.4
+0.4
+0.4
-0.1
-0.2
carbon source
L-Arabinose (C); with MOPS
+0.7
+0.2
+0.3
-0.1
-0.0
carbon source
acetate (C)
+0.3
+0.8
+0.3
-0.2
+0.1
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