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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS02380 and PFLU_RS02385 are separated by 269 nucleotides
PFLU_RS02385 and PFLU_RS02390 overlap by 8 nucleotides
PFLU_RS02390 and PFLU_RS02395 are separated by 774 nucleotides
PFLU_RS02395 and PFLU_RS02400 are separated by 41 nucleotides
PFLU_RS02380: PFLU_RS02380 - lipid A export permease/ATP-binding protein MsbA, at 545,287 to 547,092
_RS02380
PFLU_RS02385: PFLU_RS02385 - bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE, at 547,362 to 548,786
_RS02385
PFLU_RS02390: PFLU_RS02390 - NAD-dependent epimerase/dehydratase family protein, at 548,779 to 549,705
_RS02390
PFLU_RS02395: PFLU_RS02395 - hypothetical protein, at 550,480 to 551,439
_RS02395
PFLU_RS02400: PFLU_RS02400 - aldo/keto reductase, at 551,481 to 552,293
_RS02400
Group
Condition
PFLU
_RS02380
PFLU
_RS02385
PFLU
_RS02390
PFLU
_RS02395
PFLU
_RS02400
carbon source
L-Arabinose (C); with MOPS
N.D.
N.D.
N.D.
-0.6
N.D.
carbon source
L-Arabinose (C); with MOPS
N.D.
N.D.
N.D.
-0.6
N.D.
carbon source
acetate (C)
N.D.
N.D.
N.D.
-0.3
N.D.
carbon source
acetate (C)
N.D.
N.D.
N.D.
-0.3
N.D.
carbon source
Trisodium citrate (C)
N.D.
N.D.
N.D.
-0.3
N.D.
carbon source
L-Arabinose (C); with MOPS
N.D.
N.D.
N.D.
-0.3
N.D.
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
-0.3
N.D.
carbon source
Trisodium citrate (C); with MOPS
N.D.
N.D.
N.D.
-0.2
N.D.
carbon source
L-Arabinose (C)
N.D.
N.D.
N.D.
-0.2
N.D.
carbon source
L-Arabinose (C)
N.D.
N.D.
N.D.
-0.2
N.D.
carbon source
D-Glucose (C); with MOPS
N.D.
N.D.
N.D.
-0.2
N.D.
carbon source
Trisodium citrate (C)
N.D.
N.D.
N.D.
-0.2
N.D.
carbon source
acetate (C)
N.D.
N.D.
N.D.
-0.2
N.D.
carbon source
acetate (C)
N.D.
N.D.
N.D.
-0.2
N.D.
carbon source
succinate (C); with MOPS
N.D.
N.D.
N.D.
-0.2
N.D.
carbon source
L-Arabinose (C)
N.D.
N.D.
N.D.
-0.1
N.D.
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
-0.1
N.D.
carbon source
D-Xylose (C)
N.D.
N.D.
N.D.
-0.1
N.D.
carbon source
succinate (C); with MOPS
N.D.
N.D.
N.D.
-0.1
N.D.
carbon source
acetate (C)
N.D.
N.D.
N.D.
-0.1
N.D.
carbon source
NAG (C); with MOPS
N.D.
N.D.
N.D.
-0.1
N.D.
carbon source
succinate (C)
N.D.
N.D.
N.D.
-0.1
N.D.
carbon source
D-Glucose (C); with MOPS
N.D.
N.D.
N.D.
-0.1
N.D.
carbon source
succinate (C)
N.D.
N.D.
N.D.
+0.1
N.D.
carbon source
D,L-Lactate (C)
N.D.
N.D.
N.D.
+0.1
N.D.
carbon source
NAG (C); with MOPS
N.D.
N.D.
N.D.
+0.1
N.D.
carbon source
succinate (C)
N.D.
N.D.
N.D.
+0.1
N.D.
carbon source
NAG (C); with MOPS
N.D.
N.D.
N.D.
+0.2
N.D.
carbon source
NAG (C)
N.D.
N.D.
N.D.
+0.3
N.D.
carbon source
NAG (C)
N.D.
N.D.
N.D.
+0.3
N.D.
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