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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS01950 and PFLU_RS01955 are separated by 249 nucleotides
PFLU_RS01955 and PFLU_RS01960 are separated by 148 nucleotides
PFLU_RS01960 and PFLU_RS01965 are separated by 37 nucleotides
PFLU_RS01965 and PFLU_RS01970 are separated by 257 nucleotides
PFLU_RS01950: PFLU_RS01950 - class II poly(R)-hydroxyalkanoic acid synthase, at 436,299 to 437,978
_RS01950
PFLU_RS01955: PFLU_RS01955 - DUF971 domain-containing protein, at 438,228 to 438,605
_RS01955
PFLU_RS01960: PFLU_RS01960 - ATP-dependent protease ATPase subunit HslU, at 438,754 to 440,091
_RS01960
PFLU_RS01965: PFLU_RS01965 - ATP-dependent protease subunit HslV, at 440,129 to 440,659
_RS01965
PFLU_RS01970: PFLU_RS01970 - cell division protein, at 440,917 to 441,618
_RS01970
Group
Condition
PFLU
_RS01950
PFLU
_RS01955
PFLU
_RS01960
PFLU
_RS01965
PFLU
_RS01970
carbon source
NAG (C); with MOPS
+0.1
-2.9
-1.2
-2.5
N.D.
carbon source
NAG (C); with MOPS
+0.3
-2.9
-1.2
-2.5
N.D.
carbon source
NAG (C)
+0.1
-1.8
-1.8
-2.0
N.D.
carbon source
NAG (C); with MOPS
+0.1
-2.0
-1.2
-2.1
N.D.
carbon source
NAG (C)
+0.1
-2.4
-1.5
-1.0
N.D.
carbon source
D-Glucose (C); with MOPS
+0.1
-0.5
-1.4
-2.1
N.D.
carbon source
acetate (C)
+0.2
-0.4
-1.0
-2.2
N.D.
carbon source
D-Glucose (C)
+0.3
+0.1
-1.3
-2.5
N.D.
carbon source
acetate (C)
+0.0
-0.4
-0.9
-2.1
N.D.
carbon source
acetate (C)
-0.0
-1.1
-0.9
-1.2
N.D.
carbon source
Trisodium citrate (C); with MOPS
-0.0
-0.2
-1.4
-1.2
N.D.
carbon source
acetate (C)
-0.0
-0.3
-2.1
-0.4
N.D.
carbon source
Trisodium citrate (C)
+0.2
-0.5
-0.4
-2.1
N.D.
carbon source
L-Arabinose (C)
+0.2
-0.1
-0.4
-2.4
N.D.
carbon source
L-Arabinose (C); with MOPS
+0.0
-0.7
-1.3
-0.7
N.D.
carbon source
D-Glucose (C)
+0.1
-0.4
-0.1
-2.0
N.D.
carbon source
Trisodium citrate (C); with MOPS
+0.2
-0.2
-0.5
-1.8
N.D.
carbon source
D-Glucose (C); with MOPS
+0.2
-0.6
-1.2
-0.6
N.D.
carbon source
L-Arabinose (C); with MOPS
+0.1
+0.2
-1.4
-1.0
N.D.
carbon source
Trisodium citrate (C)
+0.2
-0.9
-0.3
-1.0
N.D.
carbon source
succinate (C)
+0.0
-0.4
-0.5
-1.1
N.D.
carbon source
Trisodium citrate (C)
+0.1
-0.4
-0.6
-0.9
N.D.
carbon source
D-Xylose (C)
+0.1
-0.3
-1.2
-0.2
N.D.
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.2
-0.6
-0.9
N.D.
carbon source
L-Arabinose (C)
-0.1
-0.0
-1.0
-0.5
N.D.
carbon source
succinate (C); with MOPS
+0.2
-0.5
-1.3
+0.1
N.D.
carbon source
L-Arabinose (C); with MOPS
+0.1
+0.4
-0.9
-1.1
N.D.
carbon source
succinate (C); with MOPS
+0.1
-0.1
-1.3
+0.2
N.D.
carbon source
D,L-Lactate (C)
+0.1
-0.2
-1.7
+0.7
N.D.
carbon source
succinate (C)
+0.1
-0.9
+1.4
-0.2
N.D.
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