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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS01605 and PFLU_RS01610 overlap by 1 nucleotides
PFLU_RS01610 and PFLU_RS01615 are separated by 0 nucleotides
PFLU_RS01615 and PFLU_RS01620 are separated by 39 nucleotides
PFLU_RS01620 and PFLU_RS01625 are separated by 9 nucleotides
PFLU_RS01605: PFLU_RS01605 - imidazoleglycerol-phosphate dehydratase HisB, at 360,640 to 361,233
_RS01605
PFLU_RS01610: PFLU_RS01610 - imidazole glycerol phosphate synthase subunit HisH, at 361,233 to 361,871
_RS01610
PFLU_RS01615: PFLU_RS01615 - DUF2164 domain-containing protein, at 361,872 to 362,129
_RS01615
PFLU_RS01620: PFLU_RS01620 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase, at 362,169 to 362,906
_RS01620
PFLU_RS01625: PFLU_RS01625 - imidazole glycerol phosphate synthase subunit HisF, at 362,916 to 363,686
_RS01625
Group
Condition
PFLU
_RS01605
PFLU
_RS01610
PFLU
_RS01615
PFLU
_RS01620
PFLU
_RS01625
carbon source
D-Xylose (C)
-6.3
-5.0
-0.4
-4.5
-6.5
carbon source
D-Xylose (C)
-4.3
-5.1
-0.5
-5.3
-6.8
carbon source
NAG (C)
-5.2
-5.1
-0.6
-5.7
-5.0
carbon source
D,L-Lactate (C)
-5.3
-5.4
-0.4
-3.3
-6.6
carbon source
D,L-Lactate (C)
-5.8
-5.2
-1.2
-3.9
-5.1
carbon source
L-Arabinose (C); with MOPS
-5.2
-3.6
-0.6
-5.7
-5.1
carbon source
acetate (C)
-4.8
-3.1
-0.5
-4.9
-6.8
carbon source
succinate (C); with MOPS
-5.0
-3.7
-0.7
-5.5
-5.0
carbon source
L-Arabinose (C); with MOPS
-4.9
-4.1
-0.1
-5.5
-5.3
carbon source
NAG (C)
-5.1
-4.2
-0.4
-5.9
-4.2
carbon source
NAG (C); with MOPS
-4.6
-4.1
-0.9
-4.9
-5.0
carbon source
L-Arabinose (C); with MOPS
-4.7
-3.4
-2.1
-4.9
-4.4
carbon source
Trisodium citrate (C)
-4.7
-3.2
-0.6
-5.3
-5.2
carbon source
L-Arabinose (C)
-4.2
-2.7
-2.3
-4.8
-4.9
carbon source
Trisodium citrate (C); with MOPS
-4.4
-3.8
-0.9
-4.7
-5.1
carbon source
NAG (C); with MOPS
-4.7
-3.9
-1.9
-5.4
-3.0
carbon source
succinate (C); with MOPS
-5.2
-3.9
-0.9
-5.5
-2.9
carbon source
acetate (C)
-4.9
-2.7
-0.9
-5.1
-4.6
carbon source
NAG (C); with MOPS
-4.0
-3.7
-0.8
-4.7
-5.0
carbon source
Trisodium citrate (C); with MOPS
-4.8
-3.5
-0.8
-4.1
-5.0
carbon source
acetate (C)
-4.1
-4.2
-0.3
-4.7
-4.7
carbon source
Trisodium citrate (C)
-5.1
-3.4
-0.4
-4.1
-5.0
carbon source
L-Arabinose (C)
-4.7
-3.5
+0.0
-4.7
-4.9
carbon source
succinate (C)
-4.0
-2.3
-0.8
-5.3
-5.1
carbon source
acetate (C)
-3.8
-3.1
-0.1
-3.5
-6.7
carbon source
Trisodium citrate (C)
-3.9
-3.4
-0.6
-4.2
-5.2
carbon source
succinate (C); with MOPS
-4.2
-3.1
-1.2
-5.0
-2.9
carbon source
acetate (C)
-4.2
-3.3
+0.0
-5.2
-3.6
carbon source
L-Arabinose (C)
-3.2
-3.6
-1.4
-4.3
-2.9
carbon source
D-Glucose (C)
-4.0
-2.9
-0.4
-4.9
-3.0
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