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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS01535 and PFLU_RS01540 are separated by 13 nucleotides
PFLU_RS01540 and PFLU_RS01545 are separated by 554 nucleotides
PFLU_RS01545 and PFLU_RS01550 are separated by 118 nucleotides
PFLU_RS01550 and PFLU_RS01555 are separated by 3 nucleotides
PFLU_RS01535: PFLU_RS01535 - ABC transporter substrate-binding protein, at 345,678 to 346,430
_RS01535
PFLU_RS01540: PFLU_RS01540 - ABC transporter ATP-binding protein, at 346,444 to 347,217
_RS01540
PFLU_RS01545: PFLU_RS01545 - GABA permease, at 347,772 to 349,163
_RS01545
PFLU_RS01550: PFLU_RS01550 - hypothetical protein, at 349,282 to 349,695
_RS01550
PFLU_RS01555: PFLU_RS01555 - alpha/beta fold hydrolase, at 349,699 to 350,652
_RS01555
Group
Condition
PFLU
_RS01535
PFLU
_RS01540
PFLU
_RS01545
PFLU
_RS01550
PFLU
_RS01555
carbon source
succinate (C)
-0.2
+0.0
+0.1
N.D.
-0.2
carbon source
L-Arabinose (C); with MOPS
-0.3
-0.4
+0.3
N.D.
+0.1
carbon source
Trisodium citrate (C)
-0.1
-0.2
+0.2
N.D.
-0.1
carbon source
succinate (C); with MOPS
-0.0
-0.2
+0.1
N.D.
+0.1
carbon source
succinate (C)
-0.1
-0.1
+0.2
N.D.
-0.0
carbon source
succinate (C); with MOPS
-0.1
-0.2
+0.1
N.D.
+0.1
carbon source
NAG (C); with MOPS
-0.2
-0.2
+0.1
N.D.
+0.2
carbon source
succinate (C); with MOPS
-0.1
-0.1
+0.1
N.D.
+0.1
carbon source
NAG (C); with MOPS
-0.1
-0.1
+0.1
N.D.
+0.1
carbon source
L-Arabinose (C)
-0.1
-0.3
+0.2
N.D.
+0.2
carbon source
D-Glucose (C); with MOPS
-0.2
-0.1
+0.2
N.D.
+0.1
carbon source
L-Arabinose (C); with MOPS
-0.2
-0.1
+0.3
N.D.
+0.1
carbon source
acetate (C)
-0.2
+0.1
-0.1
N.D.
+0.3
carbon source
D-Glucose (C)
-0.2
-0.0
+0.1
N.D.
+0.2
carbon source
NAG (C); with MOPS
-0.1
-0.1
+0.1
N.D.
+0.2
carbon source
succinate (C)
-0.1
-0.2
+0.1
N.D.
+0.3
carbon source
D,L-Lactate (C)
+0.2
+0.2
-0.0
N.D.
-0.1
carbon source
D-Glucose (C); with MOPS
-0.1
-0.1
+0.1
N.D.
+0.4
carbon source
L-Arabinose (C); with MOPS
-0.1
+0.1
+0.3
N.D.
+0.0
carbon source
Trisodium citrate (C); with MOPS
-0.1
+0.1
+0.3
N.D.
-0.0
carbon source
D-Glucose (C)
-0.1
+0.1
+0.2
N.D.
+0.2
carbon source
acetate (C)
-0.0
-0.0
+0.1
N.D.
+0.3
carbon source
Trisodium citrate (C); with MOPS
-0.0
-0.0
+0.2
N.D.
+0.2
carbon source
acetate (C)
+0.1
+0.0
+0.1
N.D.
+0.2
carbon source
D-Glucose (C); with MOPS
-0.0
+0.1
+0.2
N.D.
+0.1
carbon source
Trisodium citrate (C)
-0.0
-0.0
+0.3
N.D.
+0.2
carbon source
Trisodium citrate (C)
-0.0
-0.0
+0.3
N.D.
+0.2
carbon source
NAG (C)
+0.1
+0.1
+0.0
N.D.
+0.2
carbon source
L-Arabinose (C)
+0.0
-0.1
+0.4
N.D.
+0.3
carbon source
L-Arabinose (C)
+0.1
+0.1
+0.3
N.D.
+0.3
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