Private Fitness
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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS01145 and PFLU_RS01150 overlap by 4 nucleotides
PFLU_RS01150 and PFLU_RS01155 overlap by 4 nucleotides
PFLU_RS01155 and PFLU_RS01160 are separated by 244 nucleotides
PFLU_RS01160 and PFLU_RS01165 are separated by 116 nucleotides
PFLU_RS01145: PFLU_RS01145 - efflux RND transporter periplasmic adaptor subunit, at 251,059 to 252,141
_RS01145
PFLU_RS01150: PFLU_RS01150 - efflux RND transporter periplasmic adaptor subunit, at 252,138 to 253,208
_RS01150
PFLU_RS01155: PFLU_RS01155 - efflux RND transporter permease subunit, at 253,205 to 256,270
_RS01155
PFLU_RS01160: PFLU_RS01160 - glycoside hydrolase, at 256,515 to 258,692
_RS01160
PFLU_RS01165: PFLU_RS01165 - class I SAM-dependent methyltransferase, at 258,809 to 259,435
_RS01165
Group
Condition
PFLU
_RS01145
PFLU
_RS01150
PFLU
_RS01155
PFLU
_RS01160
PFLU
_RS01165
carbon source
L-Arabinose (C)
-0.3
-0.5
+0.1
-0.2
-0.5
carbon source
acetate (C)
-0.7
-0.1
-0.0
+0.0
-0.4
carbon source
L-Arabinose (C); with MOPS
-0.8
+0.1
-0.1
-0.1
-0.3
carbon source
acetate (C)
-0.7
+0.3
-0.5
+0.3
-0.3
carbon source
D-Glucose (C)
-0.2
-0.1
+0.0
-0.0
-0.4
carbon source
L-Arabinose (C)
-0.0
-0.2
+0.0
-0.2
-0.3
carbon source
NAG (C); with MOPS
-0.2
+0.0
-0.0
-0.1
-0.4
carbon source
L-Arabinose (C); with MOPS
-0.0
+0.2
+0.2
-0.0
-0.9
carbon source
NAG (C); with MOPS
+0.3
-0.0
-0.0
+0.1
-0.8
carbon source
succinate (C)
-0.3
+0.1
-0.1
-0.1
-0.1
carbon source
succinate (C); with MOPS
-0.1
+0.0
-0.1
+0.1
-0.4
carbon source
L-Arabinose (C); with MOPS
-0.4
+0.1
-0.1
+0.1
+0.0
carbon source
D,L-Lactate (C)
-0.3
-0.1
+0.1
-0.0
+0.1
carbon source
NAG (C); with MOPS
-0.4
+0.1
-0.0
-0.0
-0.0
carbon source
L-Arabinose (C)
-0.4
+0.3
-0.1
+0.0
-0.1
carbon source
Trisodium citrate (C)
-0.1
+0.2
-0.1
+0.0
-0.2
carbon source
D-Glucose (C); with MOPS
-0.0
+0.0
+0.1
-0.3
+0.2
carbon source
Trisodium citrate (C)
-0.2
+0.2
-0.0
-0.0
+0.1
carbon source
acetate (C)
-0.0
-0.1
-0.1
+0.2
+0.1
carbon source
succinate (C)
+0.2
+0.1
-0.0
+0.1
-0.2
carbon source
Trisodium citrate (C); with MOPS
+0.3
-0.2
-0.1
-0.0
+0.1
carbon source
NAG (C)
-0.3
+0.1
+0.1
+0.0
+0.3
carbon source
Trisodium citrate (C)
+0.3
+0.1
-0.1
-0.1
-0.0
carbon source
D-Glucose (C)
-0.1
+0.6
-0.1
+0.1
-0.3
carbon source
NAG (C)
-0.1
+0.1
+0.1
+0.1
+0.1
carbon source
acetate (C)
-0.1
+0.1
-0.0
+0.1
+0.2
carbon source
Trisodium citrate (C); with MOPS
-0.0
+0.2
-0.1
-0.1
+0.3
carbon source
succinate (C); with MOPS
+0.1
+0.1
+0.1
-0.1
+0.1
carbon source
D-Glucose (C); with MOPS
+0.0
+0.2
-0.0
+0.0
+0.2
carbon source
Trisodium citrate (C); with MOPS
+0.3
+0.1
+0.1
-0.0
+0.2
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