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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS00405 and PFLU_RS00410 are separated by 34 nucleotides
PFLU_RS00410 and PFLU_RS00415 are separated by 168 nucleotides
PFLU_RS00415 and PFLU_RS00420 are separated by 10 nucleotides
PFLU_RS00420 and PFLU_RS00425 overlap by 4 nucleotides
PFLU_RS00405: PFLU_RS00405 - cytochrome c5 family protein, at 82,046 to 82,348
_RS00405
PFLU_RS00410: PFLU_RS00410 - cytochrome c4, at 82,383 to 83,009
_RS00410
PFLU_RS00415: PFLU_RS00415 - thiol:disulfide interchange protein DsbA/DsbL, at 83,178 to 83,813
_RS00415
PFLU_RS00420: PFLU_RS00420 - endonuclease, at 83,824 to 84,702
_RS00420
PFLU_RS00425: PFLU_RS00425 - diguanylate cyclase, at 84,699 to 86,753
_RS00425
Group
Condition
PFLU
_RS00405
PFLU
_RS00410
PFLU
_RS00415
PFLU
_RS00420
PFLU
_RS00425
carbon source
NAG (C); with MOPS
+0.2
+0.4
-3.4
-0.4
-0.6
carbon source
D-Xylose (C)
-0.3
-0.4
-3.0
+0.0
-0.0
carbon source
NAG (C); with MOPS
+0.3
+0.3
-3.3
+0.0
-0.5
carbon source
D-Glucose (C); with MOPS
-0.1
+0.6
-2.9
-0.2
-0.4
carbon source
D-Glucose (C)
+0.1
+0.5
-2.9
-0.1
-0.4
carbon source
D-Glucose (C)
+0.5
+0.7
-3.3
-0.3
-0.3
carbon source
L-Arabinose (C); with MOPS
+0.3
+1.0
-3.6
-0.2
-0.3
carbon source
NAG (C); with MOPS
+0.7
+0.2
-2.9
-0.3
-0.5
carbon source
D-Glucose (C)
+0.4
+0.6
-3.4
-0.2
-0.2
carbon source
Trisodium citrate (C); with MOPS
+0.2
+0.7
-3.0
-0.1
-0.4
carbon source
Trisodium citrate (C); with MOPS
+0.2
+0.6
-3.0
-0.1
-0.4
carbon source
NAG (C)
+0.2
-0.3
-2.4
+0.2
-0.2
carbon source
succinate (C); with MOPS
+0.1
+0.6
-3.1
+0.1
-0.2
carbon source
D-Glucose (C); with MOPS
+0.4
+0.8
-3.0
-0.3
-0.2
carbon source
L-Arabinose (C); with MOPS
+0.1
+0.3
-2.2
-0.2
-0.2
carbon source
D-Glucose (C); with MOPS
+0.3
+0.5
-2.7
-0.1
-0.2
carbon source
L-Arabinose (C); with MOPS
+0.2
+1.0
-2.8
-0.3
-0.3
carbon source
acetate (C)
+0.7
+0.8
-2.8
-0.4
-0.4
carbon source
acetate (C)
+0.8
+1.1
-3.2
-0.4
-0.4
carbon source
succinate (C); with MOPS
+0.1
+0.4
-2.3
+0.0
-0.2
carbon source
succinate (C)
+0.2
+0.6
-2.7
+0.1
-0.2
carbon source
L-Arabinose (C)
+0.3
+1.2
-2.8
-0.6
-0.1
carbon source
Trisodium citrate (C); with MOPS
+0.2
+0.8
-2.4
-0.0
-0.5
carbon source
L-Arabinose (C)
+0.6
+1.5
-3.2
-0.6
-0.1
carbon source
succinate (C); with MOPS
+0.5
+0.3
-2.1
-0.1
-0.3
carbon source
Trisodium citrate (C)
+0.5
+0.8
-2.5
-0.0
-0.3
carbon source
Trisodium citrate (C)
+0.2
+0.9
-2.2
-0.1
-0.3
carbon source
Trisodium citrate (C)
+0.4
+0.7
-2.1
+0.1
-0.5
carbon source
acetate (C)
+0.6
+1.1
-2.3
-0.1
-0.5
carbon source
L-Arabinose (C)
+0.8
+1.3
-2.5
-0.1
-0.1
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