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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS00340 and PFLU_RS00345 are separated by 50 nucleotides
PFLU_RS00345 and PFLU_RS00350 overlap by 1 nucleotides
PFLU_RS00350 and PFLU_RS00355 are separated by 265 nucleotides
PFLU_RS00355 and PFLU_RS00360 are separated by 65 nucleotides
PFLU_RS00340: PFLU_RS00340 - ABC transporter substrate-binding protein, at 67,896 to 68,666
_RS00340
PFLU_RS00345: PFLU_RS00345 - ABC transporter permease, at 68,717 to 69,391
_RS00345
PFLU_RS00350: PFLU_RS00350 - methionine ABC transporter ATP-binding protein, at 69,391 to 70,398
_RS00350
PFLU_RS00355: PFLU_RS00355 - catalase HPII, at 70,664 to 72,805
_RS00355
PFLU_RS00360: PFLU_RS00360 - hypothetical protein, at 72,871 to 73,590
_RS00360
Group
Condition
PFLU
_RS00340
PFLU
_RS00345
PFLU
_RS00350
PFLU
_RS00355
PFLU
_RS00360
carbon source
NAG (C)
-0.1
+0.3
-0.1
-0.1
-0.2
carbon source
succinate (C)
-0.1
+0.3
+0.3
-0.1
+0.2
carbon source
succinate (C)
+0.0
-0.2
+0.5
+0.1
+0.3
carbon source
acetate (C)
+0.1
-0.0
+0.1
-0.1
+0.6
carbon source
D-Glucose (C); with MOPS
+0.0
-0.0
+0.3
-0.1
+0.6
carbon source
D-Glucose (C); with MOPS
+0.0
-0.3
+0.4
-0.0
+0.6
carbon source
Trisodium citrate (C)
+0.0
+0.1
+0.3
+0.0
+0.3
carbon source
L-Arabinose (C); with MOPS
-0.2
+0.3
+0.3
+0.0
+0.3
carbon source
D-Xylose (C)
+0.0
+0.4
+0.2
+0.0
+0.2
carbon source
D-Glucose (C)
+0.0
-0.1
+0.5
+0.0
+0.3
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.1
+0.3
-0.1
+0.5
carbon source
D-Glucose (C)
-0.2
+0.1
+0.3
-0.0
+0.7
carbon source
D-Glucose (C)
-0.1
+0.2
+0.1
-0.1
+0.6
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.4
+0.3
-0.2
+0.3
carbon source
NAG (C); with MOPS
-0.0
+0.3
+0.4
-0.1
+0.5
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.2
+0.3
-0.0
+0.6
carbon source
succinate (C)
-0.0
-0.1
+0.6
+0.1
+0.6
carbon source
NAG (C); with MOPS
-0.1
+0.4
+0.3
+0.2
+0.6
carbon source
succinate (C); with MOPS
-0.0
+0.5
+0.5
+0.0
+0.4
carbon source
D-Glucose (C); with MOPS
+0.2
+0.5
+0.3
-0.0
+0.4
carbon source
NAG (C); with MOPS
+0.1
+0.4
+0.3
+0.0
+0.5
carbon source
L-Arabinose (C); with MOPS
-0.1
+0.7
+0.3
+0.1
+0.6
carbon source
Trisodium citrate (C)
-0.0
+0.4
+0.5
+0.0
+0.6
carbon source
acetate (C)
-0.1
+0.5
-0.1
+0.1
+1.1
carbon source
Trisodium citrate (C)
-0.0
+0.7
+0.4
-0.1
+0.6
carbon source
L-Arabinose (C)
+0.0
+0.1
+0.3
+0.0
+1.1
carbon source
acetate (C)
+0.2
+1.0
+0.2
-0.1
+0.8
carbon source
L-Arabinose (C); with MOPS
-0.1
+0.8
+0.6
+0.0
+0.8
carbon source
L-Arabinose (C)
-0.1
+0.6
+0.7
+0.1
+0.9
carbon source
L-Arabinose (C)
+0.1
+0.9
+0.7
+0.0
+1.0
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