Private Fitness
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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS00195 and PFLU_RS00200 are separated by 115 nucleotides
PFLU_RS00200 and PFLU_RS00205 are separated by 151 nucleotides
PFLU_RS00205 and PFLU_RS00210 are separated by 218 nucleotides
PFLU_RS00210 and PFLU_RS00215 are separated by 207 nucleotides
PFLU_RS00195: PFLU_RS00195 - dodecin domain-containing protein, at 41,398 to 41,613
_RS00195
PFLU_RS00200: PFLU_RS00200 - DUF1161 domain-containing protein, at 41,729 to 41,956
_RS00200
PFLU_RS00205: PFLU_RS00205 - LLM class flavin-dependent oxidoreductase, at 42,108 to 43,109
_RS00205
PFLU_RS00210: PFLU_RS00210 - OsmC family protein, at 43,328 to 43,759
_RS00210
PFLU_RS00215: PFLU_RS00215 - DUF1161 domain-containing protein, at 43,967 to 44,206
_RS00215
Group
Condition
PFLU
_RS00195
PFLU
_RS00200
PFLU
_RS00205
PFLU
_RS00210
PFLU
_RS00215
carbon source
D-Glucose (C); with MOPS
-0.3
-0.5
-0.1
-3.2
+0.0
carbon source
acetate (C)
-0.4
-0.7
-0.2
-1.7
+0.2
carbon source
Trisodium citrate (C); with MOPS
-0.5
+0.2
-0.2
-1.3
-0.5
carbon source
D-Glucose (C); with MOPS
-0.2
-0.3
-0.1
-0.6
-0.7
carbon source
L-Arabinose (C)
-0.4
-0.6
-0.1
-0.3
-0.6
carbon source
NAG (C); with MOPS
+0.2
-0.3
-0.5
-0.9
-0.3
carbon source
L-Arabinose (C); with MOPS
+0.0
-0.7
+0.1
-1.0
-0.0
carbon source
succinate (C)
+0.1
-0.3
-0.0
-1.1
-0.2
carbon source
D,L-Lactate (C)
+0.2
+0.4
-0.1
-1.6
-0.2
carbon source
acetate (C)
+0.7
-0.3
-0.0
-1.1
-0.5
carbon source
L-Arabinose (C)
-0.4
-1.9
+0.0
+1.0
+0.1
carbon source
Trisodium citrate (C)
+0.2
-0.2
-0.0
-0.7
-0.4
carbon source
Trisodium citrate (C)
-0.7
-0.1
+0.1
+0.1
-0.4
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.0
+0.2
-0.7
-0.6
carbon source
succinate (C); with MOPS
+0.5
-0.5
-0.3
-0.4
-0.2
carbon source
NAG (C); with MOPS
-0.2
+0.1
-0.1
-0.5
-0.1
carbon source
D-Xylose (C)
+0.3
-0.3
+0.0
-0.7
-0.2
carbon source
L-Arabinose (C)
-0.2
+0.5
-0.2
-0.5
-0.2
carbon source
Trisodium citrate (C)
+0.4
-0.5
-0.2
+0.4
-0.4
carbon source
D-Glucose (C)
+0.5
-0.8
-0.3
+0.5
-0.1
carbon source
D-Glucose (C)
+0.5
+0.6
-0.0
-1.1
-0.1
carbon source
succinate (C)
-0.5
+0.5
-0.0
+0.5
-0.5
carbon source
D-Glucose (C); with MOPS
-0.1
-0.1
+0.1
+0.5
-0.5
carbon source
succinate (C)
-0.3
+0.2
-0.0
-0.2
+0.4
carbon source
D,L-Lactate (C)
+0.6
-0.0
-0.1
-0.5
+0.2
carbon source
Trisodium citrate (C); with MOPS
+0.3
-0.7
-0.0
+0.7
-0.2
carbon source
L-Arabinose (C); with MOPS
+0.3
-0.3
-0.2
+0.9
-0.5
carbon source
succinate (C); with MOPS
-0.1
-0.1
-0.0
+0.7
-0.1
carbon source
L-Arabinose (C); with MOPS
+0.6
-0.4
-0.1
+1.0
-0.3
carbon source
acetate (C)
-0.1
+0.1
-0.3
+2.8
-0.1
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