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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_16840 and OKGIIK_16845 overlap by 1 nucleotides
OKGIIK_16845 and rhaT are separated by 72 nucleotides
rhaT and OKGIIK_16855 are separated by 60 nucleotides
OKGIIK_16855 and OKGIIK_16860 are separated by 217 nucleotides
OKGIIK_16840: OKGIIK_16840 - Redoxin, at 3,692,498 to 3,693,046
_16840
OKGIIK_16845: OKGIIK_16845 - Protein-disulfide reductase, at 3,693,046 to 3,695,235
_16845
OKGIIK_16850: rhaT - EamA family transporter, at 3,695,308 to 3,696,204
rhaT
OKGIIK_16855: OKGIIK_16855 - Cation tolerance protein, at 3,696,265 to 3,696,618
_16855
OKGIIK_16860: OKGIIK_16860 - Co-chaperonin GroES, at 3,696,836 to 3,697,129
_16860
Group
Condition
OKGIIK
_16840
OKGIIK
_16845
OKGIIK
_16850
OKGIIK
_16855
OKGIIK
_16860
rhaT
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.7
N.D.
-0.2
-0.3
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.4
N.D.
-0.3
-0.2
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.7
N.D.
-0.2
-0.1
N.D.
no stress control
no stress control
-0.7
N.D.
-0.1
+0.0
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.6
N.D.
-0.1
+0.1
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.5
N.D.
-0.1
-0.0
N.D.
no stress control
no stress control
-0.3
N.D.
-0.2
+0.2
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
N.D.
-0.1
-0.1
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
N.D.
-0.1
-0.2
N.D.
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.4
N.D.
+0.0
+0.1
N.D.
no stress control
no stress control
-0.1
N.D.
-0.1
-0.1
N.D.
no stress control
no stress control
+0.0
N.D.
+0.1
-0.3
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.3
N.D.
+0.1
+0.0
N.D.
no stress control
no stress control
+0.0
N.D.
-0.1
-0.0
N.D.
no stress control
no stress control
+0.1
N.D.
-0.1
-0.0
N.D.
no stress control
no stress control
-0.0
N.D.
+0.1
-0.2
N.D.
pH
R2A_PIPES pH 4.5
+0.2
N.D.
-0.1
-0.1
N.D.
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.6
N.D.
+0.3
+0.3
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.0
N.D.
-0.1
+0.1
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
N.D.
-0.0
+0.2
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.1
N.D.
+0.2
-0.0
N.D.
pH
R2A_PIPES pH 4.25
+0.0
N.D.
+0.1
+0.1
N.D.
no stress control
no stress control
+0.2
N.D.
+0.1
-0.0
N.D.
no stress control
no stress control
-0.1
N.D.
+0.2
+0.3
N.D.
pH
R2A_PIPES pH 4
-0.2
N.D.
+0.4
+0.2
N.D.
pH
R2A_PIPES pH 4.25
+0.1
N.D.
+0.2
+0.1
N.D.
pH
R2A_PIPES pH 4.5
+0.3
N.D.
+0.1
+0.1
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
N.D.
+0.3
+0.1
N.D.
pH
R2A_PIPES pH 4
+0.0
N.D.
+0.3
+0.3
N.D.
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