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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
mgtA and OKGIIK_16570 are separated by 64 nucleotides
OKGIIK_16570 and dedA are separated by 9 nucleotides
dedA and dnaG are separated by 130 nucleotides
dnaG and OKGIIK_16585 are separated by 193 nucleotides
OKGIIK_16565: mgtA - magnesium-translocating P-type ATPase, at 3,639,192 to 3,641,846
mgtA
OKGIIK_16570: OKGIIK_16570 - Bile acid:sodium symporter, at 3,641,911 to 3,642,912
_16570
OKGIIK_16575: dedA - DedA family protein, at 3,642,922 to 3,643,542
dedA
OKGIIK_16580: dnaG - DNA primase, at 3,643,673 to 3,645,460
dnaG
OKGIIK_16585: OKGIIK_16585 - DUF1328 domain-containing protein, at 3,645,654 to 3,645,824
_16585
Group
Condition
OKGIIK
_16565
OKGIIK
_16570
OKGIIK
_16575
OKGIIK
_16580
OKGIIK
_16585
mgtA
dedA
dnaG
no stress control
no stress control
-3.1
-0.2
-0.1
N.D.
-0.8
no stress control
no stress control
-3.4
-0.0
-0.2
N.D.
-0.2
no stress control
no stress control
-2.5
-0.3
-0.4
N.D.
-0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-2.8
+0.1
-0.4
N.D.
-0.3
no stress control
no stress control
-2.9
-0.2
-0.1
N.D.
-0.0
no stress control
no stress control
-3.0
+0.1
-0.2
N.D.
+0.0
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-2.1
-0.3
-0.4
N.D.
-0.3
stress
R2A_PIPES with Cobalt chloride 512 uM
-2.7
+0.0
+0.0
N.D.
-0.4
no stress control
no stress control
-2.5
-0.1
-0.0
N.D.
-0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-2.5
-0.0
-0.2
N.D.
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.9
-0.0
-0.3
N.D.
-0.6
no stress control
no stress control
-2.5
-0.2
+0.1
N.D.
-0.1
no stress control
no stress control
-2.0
-0.2
+0.0
N.D.
-0.4
stress
R2A_PIPES with Cobalt chloride 512 uM
-2.1
-0.1
+0.2
N.D.
-0.5
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-2.0
-0.4
-0.0
N.D.
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-2.1
-0.0
-0.1
N.D.
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-2.1
+0.2
-0.2
N.D.
-0.3
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-1.3
-0.4
-0.2
N.D.
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-1.3
-0.1
-0.5
N.D.
-0.2
no stress control
no stress control
-1.9
+0.2
-0.2
N.D.
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-1.0
-0.1
-0.2
N.D.
-0.6
stress
R2A_PIPES with Cobalt chloride 1024 uM
-1.6
+0.3
-0.3
N.D.
-0.3
pH
R2A_PIPES pH 4
+0.3
-0.4
+0.4
N.D.
-1.1
pH
R2A_PIPES pH 4
-0.1
+0.0
+0.1
N.D.
-0.5
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.0
-0.1
+0.1
N.D.
-0.3
pH
R2A_PIPES pH 4.25
+0.4
-0.1
+0.1
N.D.
-0.5
pH
R2A_PIPES pH 4.5
+0.1
-0.4
+0.2
N.D.
+0.0
pH
R2A_PIPES pH 4.25
+0.2
-0.0
+0.1
N.D.
-0.1
pH
R2A_PIPES pH 4.5
+0.5
+0.1
+0.2
N.D.
-0.3
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