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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
cyoE and OKGIIK_16560 are separated by 319 nucleotides
OKGIIK_16560 and mgtA are separated by 156 nucleotides
mgtA and OKGIIK_16570 are separated by 64 nucleotides
OKGIIK_16570 and dedA are separated by 9 nucleotides
OKGIIK_16555: cyoE - heme o synthase, at 3,637,571 to 3,638,473
cyoE
OKGIIK_16560: OKGIIK_16560 - hypothetical protein, at 3,638,793 to 3,639,035
_16560
OKGIIK_16565: mgtA - magnesium-translocating P-type ATPase, at 3,639,192 to 3,641,846
mgtA
OKGIIK_16570: OKGIIK_16570 - Bile acid:sodium symporter, at 3,641,911 to 3,642,912
_16570
OKGIIK_16575: dedA - DedA family protein, at 3,642,922 to 3,643,542
dedA
Group
Condition
OKGIIK
_16555
OKGIIK
_16560
OKGIIK
_16565
OKGIIK
_16570
OKGIIK
_16575
cyoE
mgtA
dedA
no stress control
no stress control
-0.4
-2.4
-3.0
+0.1
-0.2
no stress control
no stress control
-0.2
-2.1
-3.4
-0.0
-0.2
no stress control
no stress control
-0.1
-2.0
-2.9
-0.2
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
-2.0
-2.8
+0.1
-0.4
no stress control
no stress control
-0.2
-1.9
-2.5
-0.3
-0.4
no stress control
no stress control
-0.2
-1.6
-3.1
-0.2
-0.1
no stress control
no stress control
-0.5
-2.0
-2.0
-0.2
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-2.0
-2.0
-0.4
-0.0
no stress control
no stress control
-0.0
-1.9
-2.5
-0.2
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.3
-1.4
-2.5
-0.0
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.3
-1.6
-2.1
-0.0
-0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.4
-0.9
-2.1
-0.3
-0.4
no stress control
no stress control
-0.1
-1.2
-2.5
-0.1
-0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.4
-1.5
-1.3
-0.4
-0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
-1.1
-2.7
+0.0
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.3
-1.4
-2.1
+0.2
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-1.2
-1.9
-0.0
-0.3
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.3
-1.8
-1.0
-0.1
-0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.2
-0.9
-2.1
-0.1
+0.2
no stress control
no stress control
-0.2
-0.9
-1.9
+0.2
-0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.8
+0.1
-1.3
-0.1
-0.5
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.7
+0.1
-1.6
+0.3
-0.3
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.4
-0.4
-0.0
-0.1
+0.1
pH
R2A_PIPES pH 4
-0.8
+0.3
-0.1
+0.0
+0.1
pH
R2A_PIPES pH 4.5
-0.2
-0.2
+0.1
-0.4
+0.2
pH
R2A_PIPES pH 4
-0.8
+0.4
+0.3
-0.4
+0.4
pH
R2A_PIPES pH 4.25
-0.1
-0.1
+0.2
-0.0
+0.1
pH
R2A_PIPES pH 4.25
-0.1
-0.1
+0.4
-0.1
+0.1
pH
R2A_PIPES pH 4.5
-0.4
+0.1
+0.5
+0.1
+0.2
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