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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_16430 and OKGIIK_16435 are separated by 33 nucleotides
OKGIIK_16435 and OKGIIK_16440 are separated by 63 nucleotides
OKGIIK_16440 and yihA are separated by 116 nucleotides
yihA and msrC are separated by 112 nucleotides
OKGIIK_16430: OKGIIK_16430 - Thiol:disulfide interchange protein, at 3,608,216 to 3,608,866
_16430
OKGIIK_16435: OKGIIK_16435 - Protein-disulfide isomerase, at 3,608,900 to 3,609,778
_16435
OKGIIK_16440: OKGIIK_16440 - Cytochrome C, at 3,609,842 to 3,610,603
_16440
OKGIIK_16445: yihA - ribosome biogenesis GTP-binding protein YihA/YsxC, at 3,610,720 to 3,611,424
yihA
OKGIIK_16450: msrC - diguanylate cyclase, at 3,611,537 to 3,612,028
msrC
Group
Condition
OKGIIK
_16430
OKGIIK
_16435
OKGIIK
_16440
OKGIIK
_16445
OKGIIK
_16450
yihA
msrC
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
-1.2
-1.9
N.D.
-0.1
no stress control
no stress control
-0.4
-0.1
-1.9
N.D.
-0.2
no stress control
no stress control
-0.1
-0.4
-1.4
N.D.
-0.1
pH
R2A_PIPES pH 4
-0.3
-0.5
-1.4
N.D.
+0.5
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.4
-0.7
-0.1
N.D.
-0.4
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
-0.3
-0.7
N.D.
-0.1
no stress control
no stress control
-0.1
-0.3
-0.8
N.D.
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
-0.1
-1.0
N.D.
+0.1
pH
R2A_PIPES pH 4
-0.2
-0.4
-0.9
N.D.
+0.7
no stress control
no stress control
+0.0
-0.0
-0.8
N.D.
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
-0.2
-0.4
N.D.
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.3
-0.7
-0.6
N.D.
+0.3
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.0
-0.2
-0.0
N.D.
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.2
-0.3
-0.3
N.D.
+0.1
no stress control
no stress control
+0.3
+0.2
-0.9
N.D.
+0.3
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
+0.2
-0.1
N.D.
-0.2
no stress control
no stress control
+0.3
+0.1
-0.4
N.D.
+0.1
no stress control
no stress control
+0.5
+0.3
-1.3
N.D.
+0.6
no stress control
no stress control
+0.2
-0.0
-0.2
N.D.
+0.2
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.2
-0.1
+0.2
N.D.
+0.2
no stress control
no stress control
+0.6
+0.0
-0.3
N.D.
+0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.3
+0.3
-0.4
N.D.
+0.5
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.4
+0.4
-0.2
N.D.
+0.4
pH
R2A_PIPES pH 4.5
+0.3
+1.3
-0.7
N.D.
+0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.1
+0.6
N.D.
+0.3
pH
R2A_PIPES pH 4.25
+0.4
+0.6
+0.0
N.D.
+0.4
pH
R2A_PIPES pH 4.25
+0.3
+0.8
-0.0
N.D.
+0.6
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.3
+0.7
+0.3
N.D.
+0.5
pH
R2A_PIPES pH 4.5
+0.4
+1.5
-0.2
N.D.
+0.2
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