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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
hrpA and OKGIIK_16275 are separated by 15 nucleotides
OKGIIK_16275 and OKGIIK_16280 are separated by 54 nucleotides
OKGIIK_16280 and OKGIIK_16285 are separated by 163 nucleotides
OKGIIK_16285 and OKGIIK_16290 are separated by 783 nucleotides
OKGIIK_16270: hrpA - HrpA-like RNA helicase, at 3,566,775 to 3,569,309
hrpA
OKGIIK_16275: OKGIIK_16275 - Diguanylate cyclase, at 3,569,325 to 3,572,078
_16275
OKGIIK_16280: OKGIIK_16280 - Peptidase M28, at 3,572,133 to 3,573,539
_16280
OKGIIK_16285: OKGIIK_16285 - PKD domain-containing protein, at 3,573,703 to 3,575,601
_16285
OKGIIK_16290: OKGIIK_16290 - NAD(FAD)-utilizing dehydrogenase, at 3,576,385 to 3,577,617
_16290
Group
Condition
OKGIIK
_16270
OKGIIK
_16275
OKGIIK
_16280
OKGIIK
_16285
OKGIIK
_16290
hrpA
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
-0.2
+0.1
-0.2
-0.2
no stress control
no stress control
-0.0
-0.1
-0.0
-0.0
-0.2
no stress control
no stress control
-0.1
-0.1
+0.1
+0.0
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.1
+0.1
+0.3
-0.1
-0.3
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.1
+0.1
+0.1
-0.1
-0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.0
-0.0
-0.0
+0.0
+0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.0
+0.0
+0.2
+0.1
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
+0.1
+0.2
+0.0
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
-0.1
+0.2
-0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.0
+0.2
+0.0
-0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.2
+0.0
+0.2
-0.0
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.1
+0.2
+0.1
+0.2
-0.0
no stress control
no stress control
+0.1
+0.1
+0.3
-0.1
-0.1
pH
R2A_PIPES pH 4.25
+0.3
+0.0
+0.1
+0.1
-0.3
no stress control
no stress control
+0.1
+0.1
+0.1
+0.0
+0.0
pH
R2A_PIPES pH 4.5
+0.1
+0.0
+0.4
-0.0
-0.1
pH
R2A_PIPES pH 4.25
+0.1
+0.1
+0.2
+0.1
-0.0
no stress control
no stress control
+0.1
-0.0
+0.2
+0.0
+0.1
no stress control
no stress control
+0.2
+0.1
+0.3
+0.1
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.3
+0.0
+0.0
-0.0
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
-0.0
+0.3
+0.1
+0.3
no stress control
no stress control
+0.2
+0.0
+0.3
+0.1
+0.0
no stress control
no stress control
+0.3
+0.1
+0.2
+0.0
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
+0.1
+0.2
+0.1
+0.1
pH
R2A_PIPES pH 4
+0.1
+0.1
+0.3
+0.3
-0.1
pH
R2A_PIPES pH 4.5
+0.0
+0.1
+0.2
-0.0
+0.4
pH
R2A_PIPES pH 4
-0.0
+0.2
+0.2
+0.3
+0.3
no stress control
no stress control
+0.4
-0.0
+0.3
-0.1
+0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.2
+0.1
+0.2
+0.1
+0.4
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