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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_15810 and OKGIIK_15815 are separated by 861 nucleotides
OKGIIK_15815 and plsC are separated by 188 nucleotides
plsC and ampE are separated by 6 nucleotides
ampE and nudC are separated by 145 nucleotides
OKGIIK_15810: OKGIIK_15810 - TonB-dependent receptor, at 3,451,232 to 3,454,144
_15810
OKGIIK_15815: OKGIIK_15815 - TonB-dependent receptor, at 3,455,006 to 3,458,020
_15815
OKGIIK_15820: plsC - glycerol acyltransferase, at 3,458,209 to 3,460,083
plsC
OKGIIK_15825: ampE - beta-lactamase induction protein, at 3,460,090 to 3,460,959
ampE
OKGIIK_15830: nudC - NAD(+) diphosphatase, at 3,461,105 to 3,462,079
nudC
Group
Condition
OKGIIK
_15810
OKGIIK
_15815
OKGIIK
_15820
OKGIIK
_15825
OKGIIK
_15830
plsC
ampE
nudC
pH
R2A_PIPES pH 4.5
-0.0
-0.2
-0.0
-0.3
-0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.2
-0.1
-0.4
-0.0
pH
R2A_PIPES pH 4.25
-0.0
-0.4
-0.2
-0.1
+0.0
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.0
-0.3
-0.1
-0.2
+0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.1
-0.3
-0.2
+0.2
-0.2
no stress control
no stress control
-0.0
-0.2
+0.1
-0.1
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.0
-0.2
+0.1
-0.0
-0.2
no stress control
no stress control
-0.1
-0.3
-0.1
-0.0
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
-0.4
-0.1
-0.0
+0.3
no stress control
no stress control
-0.0
-0.2
-0.1
-0.1
+0.1
pH
R2A_PIPES pH 4.5
+0.0
-0.3
-0.1
+0.2
-0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.0
-0.3
-0.0
+0.1
-0.0
no stress control
no stress control
-0.0
-0.3
+0.1
-0.3
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.0
-0.3
-0.1
+0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
-0.2
-0.0
-0.1
+0.1
no stress control
no stress control
+0.1
-0.1
-0.1
-0.1
-0.1
no stress control
no stress control
-0.1
-0.2
-0.1
+0.1
+0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.0
-0.3
-0.1
+0.2
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.3
-0.0
-0.1
+0.3
pH
R2A_PIPES pH 4.25
+0.1
-0.4
-0.0
+0.1
+0.3
no stress control
no stress control
+0.1
-0.1
+0.0
+0.0
+0.1
no stress control
no stress control
+0.0
-0.2
+0.1
+0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
-0.2
+0.0
+0.1
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
-0.2
-0.0
+0.3
+0.1
pH
R2A_PIPES pH 4
+0.4
-0.4
-0.0
+0.6
-0.2
no stress control
no stress control
+0.1
-0.1
-0.0
+0.1
+0.1
pH
R2A_PIPES pH 4
+0.4
-0.4
-0.2
+0.8
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+1.4
-0.4
-0.1
-0.1
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+1.6
-0.2
+0.0
+0.1
+0.3
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