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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
acs and OKGIIK_15195 are separated by 98 nucleotides
OKGIIK_15195 and OKGIIK_15200 are separated by 206 nucleotides
OKGIIK_15200 and OKGIIK_15205 are separated by 20 nucleotides
OKGIIK_15205 and ompR are separated by 13 nucleotides
OKGIIK_15190: acs - acetate--CoA ligase, at 3,302,511 to 3,304,451
acs
OKGIIK_15195: OKGIIK_15195 - LuxR family transcriptional regulator, at 3,304,550 to 3,305,221
_15195
OKGIIK_15200: OKGIIK_15200 - Glutamate synthase subunit alpha, at 3,305,428 to 3,310,131
_15200
OKGIIK_15205: OKGIIK_15205 - Glutamate synthase, at 3,310,152 to 3,311,615
_15205
OKGIIK_15210: ompR - DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain, at 3,311,629 to 3,315,108
ompR
Group
Condition
OKGIIK
_15190
OKGIIK
_15195
OKGIIK
_15200
OKGIIK
_15205
OKGIIK
_15210
acs
ompR
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.3
-0.8
-0.0
-0.2
-0.6
no stress control
no stress control
-0.5
-0.7
+0.0
-0.0
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.2
-1.0
+0.0
+0.0
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.3
-0.7
+0.0
+0.4
-0.7
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.3
-0.7
+0.0
+0.0
-0.3
no stress control
no stress control
-0.4
-0.5
-0.0
-0.0
-0.3
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.4
-0.6
+0.1
+0.1
-0.3
no stress control
no stress control
-0.5
-0.4
+0.1
-0.1
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.4
-0.7
+0.0
+0.1
-0.1
no stress control
no stress control
-0.4
-0.7
+0.2
+0.2
-0.1
no stress control
no stress control
-0.3
-0.7
+0.1
+0.3
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.3
-0.5
+0.0
+0.1
-0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
-0.6
+0.0
+0.2
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
-0.3
+0.1
-0.2
+0.0
no stress control
no stress control
-0.2
-0.2
+0.0
+0.1
-0.3
no stress control
no stress control
-0.3
-0.4
-0.0
+0.3
-0.1
pH
R2A_PIPES pH 4.5
-0.2
-0.4
+0.0
+0.3
-0.2
no stress control
no stress control
-0.2
-0.3
+0.0
+0.1
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.6
-0.3
+0.1
+0.4
-0.0
no stress control
no stress control
-0.2
-0.5
+0.1
+0.3
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.2
-0.2
-0.0
+0.2
-0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.1
-0.2
+0.0
+0.2
-0.3
pH
R2A_PIPES pH 4.5
-0.2
-0.1
-0.1
+0.4
-0.4
pH
R2A_PIPES pH 4
-0.2
-0.5
-0.0
+0.2
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.1
-0.2
+0.1
+0.1
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.3
-0.1
+0.2
+0.1
pH
R2A_PIPES pH 4.25
-0.2
-0.2
-0.0
+0.2
+0.1
pH
R2A_PIPES pH 4
-0.3
+0.1
-0.0
+0.0
+0.3
pH
R2A_PIPES pH 4.25
-0.2
-0.1
+0.0
+0.6
+0.0
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OKGIIK_15200
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