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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_15135 and yhcF are separated by 123 nucleotides
yhcF and ccmA are separated by 1 nucleotides
ccmA and OKGIIK_15150 overlap by 4 nucleotides
OKGIIK_15150 and OKGIIK_15155 are separated by 21 nucleotides
OKGIIK_15135: OKGIIK_15135 - Peptidase S9, at 3,290,366 to 3,292,423
_15135
OKGIIK_15140: yhcF - GntR family transcriptional regulator, at 3,292,547 to 3,292,930
yhcF
OKGIIK_15145: ccmA - ABC transporter ATP-binding protein, at 3,292,932 to 3,293,825
ccmA
OKGIIK_15150: OKGIIK_15150 - hypothetical protein, at 3,293,822 to 3,294,796
_15150
OKGIIK_15155: OKGIIK_15155 - hypothetical protein, at 3,294,818 to 3,295,297
_15155
Group
Condition
OKGIIK
_15135
OKGIIK
_15140
OKGIIK
_15145
OKGIIK
_15150
OKGIIK
_15155
yhcF
ccmA
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.0
-0.0
-0.1
-0.4
-0.4
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.1
-0.0
-0.1
+0.0
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
+0.2
+0.3
+0.1
-0.8
no stress control
no stress control
+0.1
+0.0
-0.1
-0.2
-0.1
pH
R2A_PIPES pH 4.5
+0.2
-0.1
-0.3
-0.1
-0.0
pH
R2A_PIPES pH 4.25
-0.0
-0.1
-0.0
+0.2
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
+0.1
-0.0
-0.0
-0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
+0.0
+0.2
-0.5
+0.1
no stress control
no stress control
+0.0
+0.3
+0.1
-0.4
-0.1
no stress control
no stress control
+0.1
-0.1
+0.2
-0.1
-0.2
no stress control
no stress control
+0.1
-0.1
+0.1
+0.1
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.3
-0.2
-0.2
-0.1
no stress control
no stress control
-0.0
+0.3
-0.0
+0.0
-0.3
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
+0.2
-0.2
-0.1
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.1
+0.2
-0.3
-0.0
pH
R2A_PIPES pH 4.5
+0.2
-0.2
+0.1
+0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.4
+0.2
-0.3
-0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.2
-0.0
+0.0
-0.0
+0.0
no stress control
no stress control
+0.0
+0.0
+0.2
-0.1
+0.1
no stress control
no stress control
+0.1
+0.2
+0.1
+0.2
-0.2
pH
R2A_PIPES pH 4
+0.0
+0.5
-0.4
+0.1
-0.0
pH
R2A_PIPES pH 4.25
-0.0
+0.3
-0.1
+0.1
+0.0
pH
R2A_PIPES pH 4
+0.0
+0.4
+0.1
+0.1
-0.3
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.0
+0.4
+0.0
+0.3
-0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
+0.2
-0.0
+0.1
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.1
+0.2
+0.3
+0.0
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
+0.1
+0.2
+0.1
+0.2
no stress control
no stress control
+0.1
+0.3
+0.2
+0.1
+0.1
no stress control
no stress control
-0.0
+0.4
+0.7
-0.0
-0.2
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OKGIIK_15145
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