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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_14775 and OKGIIK_14780 are separated by 76 nucleotides
OKGIIK_14780 and OKGIIK_14785 overlap by 4 nucleotides
OKGIIK_14785 and OKGIIK_14790 overlap by 4 nucleotides
OKGIIK_14790 and OKGIIK_14795 are separated by 115 nucleotides
OKGIIK_14775: OKGIIK_14775 - hypothetical protein, at 3,220,687 to 3,221,586
_14775
OKGIIK_14780: OKGIIK_14780 - RNA polymerase subunit sigma-70, at 3,221,663 to 3,222,247
_14780
OKGIIK_14785: OKGIIK_14785 - Anti-sigma-W factor RsiW, at 3,222,244 to 3,222,891
_14785
OKGIIK_14790: OKGIIK_14790 - Serine protease, at 3,222,888 to 3,224,192
_14790
OKGIIK_14795: OKGIIK_14795 - Conjugal transfer protein TraR, at 3,224,308 to 3,224,691
_14795
Group
Condition
OKGIIK
_14775
OKGIIK
_14780
OKGIIK
_14785
OKGIIK
_14790
OKGIIK
_14795
pH
R2A_PIPES pH 4
+0.0
+0.2
-0.5
-0.1
-1.1
no stress control
no stress control
+0.1
+0.5
-0.1
-0.1
-1.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.0
+0.1
-0.3
-0.0
-0.3
no stress control
no stress control
+0.1
+0.1
-0.2
-0.1
-0.2
no stress control
no stress control
+0.0
+0.4
+0.1
-0.1
-0.6
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.2
+0.2
+0.1
-0.0
-0.6
no stress control
no stress control
+0.1
+0.1
-0.1
-0.1
-0.2
no stress control
no stress control
-0.1
+0.3
-0.4
+0.1
-0.0
pH
R2A_PIPES pH 4.25
+0.2
-0.0
-0.3
+0.2
-0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
+0.0
+0.2
-0.0
-0.4
pH
R2A_PIPES pH 4.5
+0.1
-0.0
-0.1
+0.1
-0.1
no stress control
no stress control
+0.2
+0.4
-0.4
-0.1
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.0
+0.2
+0.0
-0.0
-0.2
pH
R2A_PIPES pH 4
+0.1
+0.4
-0.5
+0.0
-0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
+0.3
-0.1
-0.0
-0.2
no stress control
no stress control
+0.1
+0.4
-0.4
+0.1
-0.2
pH
R2A_PIPES pH 4.25
+0.1
+0.5
-0.2
-0.2
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.0
+0.4
-0.4
-0.0
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.0
+0.1
+0.2
-0.1
-0.1
no stress control
no stress control
+0.0
+0.1
+0.1
-0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.2
+0.1
-0.2
+0.1
+0.5
no stress control
no stress control
+0.2
+0.5
+0.3
+0.2
-0.9
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.3
+0.1
+0.0
-0.3
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.1
+0.3
+0.1
+0.1
-0.1
pH
R2A_PIPES pH 4.5
+0.2
+0.5
-0.1
-0.1
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
+0.4
-0.3
+0.2
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.4
+0.3
+0.1
-0.1
-0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.0
-0.0
-0.2
+0.2
+0.6
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.0
+0.2
+0.3
-0.0
+0.1
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