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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_14295 and OKGIIK_14300 are separated by 170 nucleotides
OKGIIK_14300 and OKGIIK_14305 overlap by 4 nucleotides
OKGIIK_14305 and OKGIIK_14310 are separated by 154 nucleotides
OKGIIK_14310 and OKGIIK_14315 are separated by 81 nucleotides
OKGIIK_14295: OKGIIK_14295 - Lipid A 3-O-deacylase, at 3,116,748 to 3,117,275
_14295
OKGIIK_14300: OKGIIK_14300 - Multidrug transporter, at 3,117,446 to 3,118,933
_14300
OKGIIK_14305: OKGIIK_14305 - insulinase family protein, at 3,118,930 to 3,120,297
_14305
OKGIIK_14310: OKGIIK_14310 - DUF2239 domain-containing protein, at 3,120,452 to 3,121,042
_14310
OKGIIK_14315: OKGIIK_14315 - MFS transporter, at 3,121,124 to 3,122,416
_14315
Group
Condition
OKGIIK
_14295
OKGIIK
_14300
OKGIIK
_14305
OKGIIK
_14310
OKGIIK
_14315
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.0
-0.2
-0.0
-0.3
+0.1
no stress control
no stress control
-0.4
+0.1
-0.1
-0.1
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.2
+0.0
-0.0
-0.2
+0.2
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.1
+0.2
-0.1
-0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.0
+0.2
+0.1
-0.0
no stress control
no stress control
+0.1
+0.1
+0.0
+0.1
-0.3
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
-0.0
+0.0
-0.0
-0.1
no stress control
no stress control
+0.2
-0.1
+0.1
-0.1
+0.0
no stress control
no stress control
+0.1
+0.1
+0.0
-0.3
+0.2
no stress control
no stress control
+0.1
+0.1
+0.2
-0.1
-0.2
no stress control
no stress control
+0.2
+0.1
+0.0
-0.1
+0.0
no stress control
no stress control
+0.3
+0.1
+0.0
-0.2
-0.0
pH
R2A_PIPES pH 4.5
+0.2
+0.2
-0.2
-0.1
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
-0.1
+0.1
-0.2
+0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.2
+0.1
-0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.3
+0.2
+0.0
+0.0
+0.3
pH
R2A_PIPES pH 4.5
+0.1
+0.3
-0.2
+0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.0
-0.1
+0.1
+0.2
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.3
+0.2
-0.0
-0.1
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
+0.1
+0.1
+0.1
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.2
+0.2
-0.1
+0.0
+0.2
pH
R2A_PIPES pH 4.25
+0.2
+0.2
+0.0
-0.0
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
+0.1
+0.1
-0.0
+0.1
no stress control
no stress control
+0.1
-0.1
+0.4
+0.2
+0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.4
+0.1
+0.2
-0.2
+0.2
no stress control
no stress control
+0.4
+0.2
-0.1
-0.1
+0.3
pH
R2A_PIPES pH 4.25
+0.4
+0.2
+0.1
-0.0
+0.1
pH
R2A_PIPES pH 4
+1.7
+0.2
+0.0
-0.1
-0.0
pH
R2A_PIPES pH 4
+1.7
+0.4
+0.1
-0.1
+0.1
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