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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_14280 and OKGIIK_14285 are separated by 8 nucleotides
OKGIIK_14285 and emrB are separated by 145 nucleotides
emrB and OKGIIK_14295 are separated by 47 nucleotides
OKGIIK_14295 and OKGIIK_14300 are separated by 170 nucleotides
OKGIIK_14280: OKGIIK_14280 - Multidrug RND transporter, at 3,112,321 to 3,113,811
_14280
OKGIIK_14285: OKGIIK_14285 - Hemolysin D, at 3,113,820 to 3,115,028
_14285
OKGIIK_14290: emrB - MFS transporter, at 3,115,174 to 3,116,700
emrB
OKGIIK_14295: OKGIIK_14295 - Lipid A 3-O-deacylase, at 3,116,748 to 3,117,275
_14295
OKGIIK_14300: OKGIIK_14300 - Multidrug transporter, at 3,117,446 to 3,118,933
_14300
Group
Condition
OKGIIK
_14280
OKGIIK
_14285
OKGIIK
_14290
OKGIIK
_14295
OKGIIK
_14300
emrB
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.0
-0.5
+0.0
+0.0
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.4
-0.2
+0.2
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
-0.2
-0.1
-0.2
+0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.1
-0.2
-0.1
+0.1
-0.1
no stress control
no stress control
+0.1
-0.0
+0.1
-0.4
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.2
+0.0
+0.0
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.0
+0.1
-0.2
-0.0
pH
R2A_PIPES pH 4.5
+0.1
-0.3
-0.2
+0.2
+0.2
no stress control
no stress control
+0.2
-0.0
-0.2
+0.1
-0.1
no stress control
no stress control
-0.1
-0.2
+0.1
+0.2
+0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.1
-0.0
+0.0
-0.1
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.0
-0.3
-0.1
+0.2
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
-0.2
+0.2
-0.3
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
-0.3
-0.0
+0.2
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.0
-0.0
+0.0
+0.0
+0.1
no stress control
no stress control
+0.0
-0.0
-0.1
+0.1
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.0
-0.1
-0.2
+0.4
+0.1
no stress control
no stress control
+0.1
-0.0
-0.0
+0.2
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.2
-0.0
+0.3
+0.2
no stress control
no stress control
-0.0
-0.2
+0.0
+0.3
+0.1
pH
R2A_PIPES pH 4.5
+0.0
-0.1
-0.0
+0.1
+0.3
no stress control
no stress control
+0.1
+0.1
+0.0
+0.1
+0.1
no stress control
no stress control
+0.1
+0.1
+0.2
+0.1
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
+0.0
+0.1
+0.2
+0.2
no stress control
no stress control
-0.0
+0.0
-0.0
+0.4
+0.2
pH
R2A_PIPES pH 4.25
+0.2
-0.0
+0.1
+0.2
+0.2
pH
R2A_PIPES pH 4.25
+0.1
-0.1
+0.0
+0.4
+0.2
pH
R2A_PIPES pH 4
-0.0
-0.0
-0.1
+1.7
+0.2
pH
R2A_PIPES pH 4
+0.2
-0.2
-0.1
+1.7
+0.4
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OKGIIK_14290
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