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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_14230 and glk are separated by 100 nucleotides
glk and gluP are separated by 426 nucleotides
gluP and purR are separated by 276 nucleotides
purR and kex1 overlap by 8 nucleotides
OKGIIK_14230: OKGIIK_14230 - TonB-dependent receptor, at 3,099,844 to 3,102,564
_14230
OKGIIK_14235: glk - glucokinase, at 3,102,665 to 3,103,762
glk
OKGIIK_14240: gluP - glucose/galactose MFS transporter, at 3,104,189 to 3,105,475
gluP
OKGIIK_14245: purR - LacI family transcriptional regulator, at 3,105,752 to 3,106,828
purR
OKGIIK_14250: kex1 - peptidase S10, at 3,106,821 to 3,108,422
kex1
Group
Condition
OKGIIK
_14230
OKGIIK
_14235
OKGIIK
_14240
OKGIIK
_14245
OKGIIK
_14250
glk
gluP
purR
kex1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.0
-0.3
-0.2
-0.3
+0.0
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.0
+0.0
-0.3
-0.4
-0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.0
-0.3
-0.0
-0.2
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
-0.2
-0.2
-0.0
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
+0.0
-0.2
-0.0
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.0
-0.3
+0.0
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
+0.0
-0.2
-0.2
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.2
+0.1
-0.2
-0.0
+0.0
no stress control
no stress control
-0.1
+0.2
-0.2
-0.0
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.0
+0.2
-0.1
-0.2
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
+0.0
-0.1
+0.0
-0.0
no stress control
no stress control
-0.0
+0.1
+0.1
-0.2
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
-0.1
+0.1
-0.0
-0.0
no stress control
no stress control
+0.1
+0.3
-0.3
-0.1
+0.0
no stress control
no stress control
-0.1
+0.3
-0.1
-0.1
-0.0
pH
R2A_PIPES pH 4.25
-0.0
+0.1
-0.1
+0.0
+0.0
pH
R2A_PIPES pH 4.5
+0.0
+0.3
-0.0
-0.2
-0.1
no stress control
no stress control
-0.1
+0.3
+0.1
-0.2
-0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.1
+0.5
-0.1
-0.3
+0.1
no stress control
no stress control
+0.0
+0.0
-0.1
+0.1
+0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.0
+0.1
+0.1
-0.1
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.0
+0.3
-0.1
+0.1
-0.2
pH
R2A_PIPES pH 4
+0.1
-0.3
-0.0
+0.5
-0.1
pH
R2A_PIPES pH 4.25
-0.1
+0.1
+0.1
+0.1
-0.0
no stress control
no stress control
-0.0
+0.6
+0.0
-0.2
-0.1
no stress control
no stress control
-0.1
+0.3
-0.1
+0.3
+0.0
no stress control
no stress control
-0.0
+0.6
-0.0
+0.1
-0.1
pH
R2A_PIPES pH 4.5
-0.0
+0.5
+0.1
+0.0
+0.0
pH
R2A_PIPES pH 4
+0.1
+0.2
-0.0
+0.5
+0.1
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OKGIIK_14240
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