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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
mnhC and OKGIIK_14045 overlap by 1 nucleotides
OKGIIK_14045 and ompR are separated by 298 nucleotides
ompR and OKGIIK_14055 overlap by 4 nucleotides
OKGIIK_14055 and OKGIIK_14060 are separated by 8 nucleotides
OKGIIK_14040: mnhC - Na+/H+ antiporter subunit C, at 3,050,121 to 3,050,462
mnhC
OKGIIK_14045: OKGIIK_14045 - Cation:proton antiporter, at 3,050,462 to 3,053,368
_14045
OKGIIK_14050: ompR - DNA-binding response regulator, at 3,053,667 to 3,054,332
ompR
OKGIIK_14055: OKGIIK_14055 - Sensor protein QseC, at 3,054,329 to 3,055,723
_14055
OKGIIK_14060: OKGIIK_14060 - YVTN family beta-propeller domain-containing protein, at 3,055,732 to 3,056,751
_14060
Group
Condition
OKGIIK
_14040
OKGIIK
_14045
OKGIIK
_14050
OKGIIK
_14055
OKGIIK
_14060
mnhC
ompR
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
-0.5
-0.1
-0.2
-0.1
no stress control
no stress control
N.D.
-0.3
-0.2
-0.1
-0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
-0.8
+0.0
+0.1
+0.1
no stress control
no stress control
N.D.
-0.1
-0.0
-0.3
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
-0.5
+0.0
-0.1
-0.0
no stress control
no stress control
N.D.
-0.4
-0.0
+0.1
-0.1
no stress control
no stress control
N.D.
-0.4
-0.1
+0.0
-0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
-0.3
+0.2
-0.2
-0.2
stress
R2A_PIPES with Nickel (II) chloride 424 uM
N.D.
-0.4
+0.1
-0.2
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.2
-0.1
-0.3
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.4
+0.1
-0.1
+0.0
no stress control
no stress control
N.D.
-0.4
+0.4
-0.2
-0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
-0.5
-0.1
+0.0
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
-0.3
+0.1
+0.0
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.0
-0.0
-0.1
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
-0.7
-0.3
+0.4
+0.4
no stress control
no stress control
N.D.
-0.3
+0.3
-0.0
-0.1
no stress control
no stress control
N.D.
-0.2
-0.3
+0.2
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.1
-0.1
+0.1
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
-0.2
+0.1
-0.1
+0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
N.D.
-0.3
+0.2
+0.1
+0.0
no stress control
no stress control
N.D.
-0.2
+0.2
+0.2
-0.0
pH
R2A_PIPES pH 4.5
N.D.
-0.1
-0.2
+0.4
+0.1
pH
R2A_PIPES pH 4.25
N.D.
-0.2
-0.0
+0.6
+0.0
pH
R2A_PIPES pH 4.5
N.D.
-0.2
+0.0
+0.4
+0.2
no stress control
no stress control
N.D.
-0.2
+0.2
+0.2
+0.4
pH
R2A_PIPES pH 4.25
N.D.
-0.1
-0.1
+0.7
+0.1
pH
R2A_PIPES pH 4
N.D.
-0.2
-0.2
+1.5
+0.0
pH
R2A_PIPES pH 4
N.D.
+0.0
+0.2
+1.3
+0.3
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