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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_13800 and OKGIIK_13805 are separated by 12 nucleotides
OKGIIK_13805 and OKGIIK_13810 overlap by 13 nucleotides
OKGIIK_13810 and OKGIIK_13815 overlap by 4 nucleotides
OKGIIK_13815 and wcaG overlap by 4 nucleotides
OKGIIK_13800: OKGIIK_13800 - O-antigen ligase domain-containing protein, at 3,000,274 to 3,001,425
_13800
OKGIIK_13805: OKGIIK_13805 - Glycosyl transferase family 1, at 3,001,438 to 3,002,439
_13805
OKGIIK_13810: OKGIIK_13810 - glycosyl transferase family 2, at 3,002,427 to 3,003,305
_13810
OKGIIK_13815: OKGIIK_13815 - Glycosyl transferase family 2, at 3,003,302 to 3,004,228
_13815
OKGIIK_13820: wcaG - NAD-dependent dehydratase, at 3,004,225 to 3,005,175
wcaG
Group
Condition
OKGIIK
_13800
OKGIIK
_13805
OKGIIK
_13810
OKGIIK
_13815
OKGIIK
_13820
wcaG
pH
R2A_PIPES pH 4
-0.7
-0.7
-0.9
+0.2
-0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.2
+0.1
-1.3
-0.4
-0.3
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.1
+0.1
-0.9
-0.1
-0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
-0.1
-1.1
-0.0
+0.0
no stress control
no stress control
-0.0
-0.3
-0.7
+0.1
-0.1
pH
R2A_PIPES pH 4
-0.3
-0.3
+0.0
+0.0
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.0
-0.4
+0.0
-0.3
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.1
-0.2
-0.3
-0.2
+0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.0
+0.1
-0.2
-0.2
-0.1
no stress control
no stress control
-0.1
+0.1
-0.5
+0.1
-0.1
no stress control
no stress control
-0.2
+0.6
-1.0
+0.1
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.0
-0.1
-0.3
+0.1
-0.1
no stress control
no stress control
-0.1
+0.1
-0.4
+0.1
-0.2
no stress control
no stress control
+0.1
+0.0
-0.6
+0.1
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.1
-0.1
+0.1
-0.1
pH
R2A_PIPES pH 4.25
-0.1
-0.1
-0.2
+0.2
-0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
+0.3
-0.6
-0.0
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.0
+0.0
-0.1
-0.1
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.2
-0.7
+0.1
+0.2
no stress control
no stress control
+0.1
+0.1
-0.5
+0.1
+0.0
no stress control
no stress control
+0.0
+0.2
-0.4
+0.1
+0.0
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.1
+0.2
-0.1
+0.1
-0.2
no stress control
no stress control
+0.1
+0.2
-0.5
+0.2
+0.1
pH
R2A_PIPES pH 4.25
-0.2
+0.1
-0.2
+0.3
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.1
+0.1
-0.1
+0.0
pH
R2A_PIPES pH 4.5
+0.0
+0.1
+0.3
-0.0
+0.1
no stress control
no stress control
-0.1
+0.2
+0.1
+0.2
+0.2
pH
R2A_PIPES pH 4.5
+0.2
+0.2
+0.1
+0.3
+0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
+0.2
+0.1
+0.3
+0.2
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