Fitness for 5 genes in Rhodanobacter sp. FW510-T8

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500 ntOKGIIK_13780 and fmt overlap by 4 nucleotidesfmt and rsmB overlap by 4 nucleotidesrsmB and arnT are separated by 107 nucleotidesarnT and OKGIIK_13800 are separated by 265 nucleotides OKGIIK_13780: OKGIIK_13780 - Peptide deformylase 2, at 2,995,374 to 2,995,943 _13780 OKGIIK_13785: fmt - methionyl-tRNA formyltransferase, at 2,995,940 to 2,996,881 fmt OKGIIK_13790: rsmB - 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB, at 2,996,878 to 2,998,179 rsmB OKGIIK_13795: arnT - PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA, at 2,998,287 to 3,000,008 arnT OKGIIK_13800: OKGIIK_13800 - O-antigen ligase domain-containing protein, at 3,000,274 to 3,001,425 _13800
Group Condition OKGIIK_13780 OKGIIK_13785 OKGIIK_13790 OKGIIK_13795 OKGIIK_13800
fmt rsmB arnT
pH R2A_PIPES pH 4 N.D. N.D. -0.7 -0.0 -0.7
no stress control no stress control N.D. N.D. -0.5 +0.1 -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. N.D. -0.1 -0.1 -0.1
stress R2A_PIPES with Cobalt chloride 1024 uM N.D. N.D. -0.1 -0.1 -0.1
pH R2A_PIPES pH 4.25 N.D. N.D. -0.2 +0.1 -0.2
pH R2A_PIPES pH 4 N.D. N.D. -0.2 +0.3 -0.3
pH R2A_PIPES pH 4.5 N.D. N.D. -0.3 +0.2 +0.0
pH R2A_PIPES pH 4.25 N.D. N.D. -0.1 +0.0 -0.1
no stress control no stress control N.D. N.D. -0.3 +0.3 -0.1
stress R2A_PIPES with Cobalt chloride 512 uM N.D. N.D. -0.1 +0.0 -0.0
stress R2A_PIPES with Cobalt chloride 512 uM N.D. N.D. -0.2 +0.1 -0.0
stress R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x N.D. N.D. -0.2 +0.1 +0.1
stress R2A_PIPES with Aluminum chloride 0.28125 mM N.D. N.D. -0.2 +0.1 +0.1
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x N.D. N.D. -0.1 +0.1 +0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. N.D. -0.2 +0.1 +0.2
no stress control no stress control N.D. N.D. -0.0 +0.1 -0.0
no stress control no stress control N.D. N.D. +0.1 +0.0 -0.1
stress R2A_PIPES with Nickel (II) chloride 424 uM N.D. N.D. -0.0 -0.0 +0.1
no stress control no stress control N.D. N.D. -0.0 +0.2 +0.0
no stress control no stress control N.D. N.D. -0.1 +0.1 +0.1
pH R2A_PIPES pH 4.5 N.D. N.D. -0.2 +0.1 +0.2
stress R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x N.D. N.D. +0.2 +0.0 -0.0
stress R2A_PIPES with Aluminum chloride 0.28125 mM N.D. N.D. -0.1 +0.0 +0.2
stress R2A_PIPES with Cadmium chloride 128 uM N.D. N.D. -0.1 +0.1 +0.1
stress R2A_PIPES with Cobalt chloride 1024 uM N.D. N.D. +0.1 +0.2 -0.2
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x N.D. N.D. +0.2 +0.2 -0.1
no stress control no stress control N.D. N.D. +0.1 +0.2 +0.1
no stress control no stress control N.D. N.D. +0.2 +0.1 +0.1
no stress control no stress control N.D. N.D. +0.4 +0.6 -0.2
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