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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_13700 and ilvA are separated by 152 nucleotides
ilvA and OKGIIK_13710 overlap by 1 nucleotides
OKGIIK_13710 and OKGIIK_13715 are separated by 70 nucleotides
OKGIIK_13715 and OKGIIK_13720 are separated by 72 nucleotides
OKGIIK_13700: OKGIIK_13700 - hypothetical protein, at 2,971,636 to 2,972,844
_13700
OKGIIK_13705: ilvA - serine dehydratase, at 2,972,997 to 2,973,944
ilvA
OKGIIK_13710: OKGIIK_13710 - Aldose epimerase, at 2,973,944 to 2,974,945
_13710
OKGIIK_13715: OKGIIK_13715 - Aminopeptidase N, at 2,975,016 to 2,977,679
_13715
OKGIIK_13720: OKGIIK_13720 - hypothetical protein, at 2,977,752 to 2,977,937
_13720
Group
Condition
OKGIIK
_13700
OKGIIK
_13705
OKGIIK
_13710
OKGIIK
_13715
OKGIIK
_13720
ilvA
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
-0.4
+0.1
-0.0
-0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.2
+0.1
-0.0
-0.2
no stress control
no stress control
+0.1
-0.3
-0.0
+0.0
-0.1
pH
R2A_PIPES pH 4
+0.1
-0.6
+0.2
+0.2
+0.1
no stress control
no stress control
+0.0
-0.1
+0.1
-0.0
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
-0.3
-0.0
+0.1
+0.3
no stress control
no stress control
+0.1
-0.2
+0.3
-0.0
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
+0.3
-0.2
+0.0
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
-0.4
+0.4
-0.2
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
-0.1
+0.1
-0.1
+0.3
no stress control
no stress control
+0.1
-0.6
+0.8
+0.1
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
+0.2
+0.2
-0.1
-0.0
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.1
-0.1
-0.0
-0.1
+0.7
no stress control
no stress control
+0.2
+0.2
+0.0
-0.1
+0.1
pH
R2A_PIPES pH 4
+0.4
-0.4
+0.1
+0.2
+0.2
no stress control
no stress control
+0.2
-0.2
+0.1
+0.3
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
+0.1
+0.1
-0.0
+0.3
no stress control
no stress control
+0.1
-0.2
-0.0
+0.1
+0.6
no stress control
no stress control
+0.1
+0.0
+0.1
-0.2
+0.5
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.0
+0.1
+0.2
+0.1
+0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
+0.4
+0.1
-0.0
+0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
+0.0
+0.4
-0.0
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.3
+0.2
-0.2
+0.4
pH
R2A_PIPES pH 4.25
+0.1
+0.2
+0.1
+0.0
+0.4
no stress control
no stress control
+0.2
-0.3
+0.2
+0.3
+0.5
pH
R2A_PIPES pH 4.5
+0.1
+0.3
+0.1
-0.1
+0.5
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.6
+0.3
-0.1
+0.3
pH
R2A_PIPES pH 4.25
+0.2
+0.4
+0.2
+0.0
+0.5
pH
R2A_PIPES pH 4.5
-0.1
+0.9
+0.1
-0.1
+1.0
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