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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_13405 and OKGIIK_13410 are separated by 47 nucleotides
OKGIIK_13410 and OKGIIK_13415 are separated by 228 nucleotides
OKGIIK_13415 and OKGIIK_13420 are separated by 31 nucleotides
OKGIIK_13420 and OKGIIK_13425 are separated by 274 nucleotides
OKGIIK_13405: OKGIIK_13405 - IS3 family transposase, at 2,895,346 to 2,896,164
_13405
OKGIIK_13410: OKGIIK_13410 - Mobile element protein, at 2,896,212 to 2,896,499
_13410
OKGIIK_13415: OKGIIK_13415 - SseB family protein, at 2,896,728 to 2,897,267
_13415
OKGIIK_13420: OKGIIK_13420 - DUF45 domain-containing protein, at 2,897,299 to 2,897,769
_13420
OKGIIK_13425: OKGIIK_13425 - DEAD/DEAH box helicase, at 2,898,044 to 2,901,340
_13425
Group
Condition
OKGIIK
_13405
OKGIIK
_13410
OKGIIK
_13415
OKGIIK
_13420
OKGIIK
_13425
no stress control
no stress control
N.D.
N.D.
-0.9
-1.5
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
N.D.
-0.2
-1.3
-0.6
no stress control
no stress control
N.D.
N.D.
-0.7
-1.1
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
-0.6
-0.4
-0.3
no stress control
no stress control
N.D.
N.D.
-0.4
-0.6
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
N.D.
-0.1
-1.3
+0.2
pH
R2A_PIPES pH 4.25
N.D.
N.D.
-0.1
-0.7
-0.4
no stress control
no stress control
N.D.
N.D.
-0.7
-0.2
-0.2
pH
R2A_PIPES pH 4
N.D.
N.D.
+0.0
-0.5
-0.6
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
+0.3
-1.1
-0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
N.D.
+0.3
-0.5
-0.7
no stress control
no stress control
N.D.
N.D.
+0.1
-1.0
+0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
N.D.
+0.0
-0.4
-0.4
stress
R2A_PIPES with Cadmium chloride 128 uM
N.D.
N.D.
-0.5
-0.0
-0.2
no stress control
no stress control
N.D.
N.D.
+0.1
-0.8
+0.1
pH
R2A_PIPES pH 4.5
N.D.
N.D.
+0.1
-0.6
-0.1
no stress control
no stress control
N.D.
N.D.
-0.1
-0.7
+0.1
no stress control
no stress control
N.D.
N.D.
-0.7
-0.1
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
N.D.
+0.3
-0.7
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
N.D.
-0.4
-0.2
+0.1
pH
R2A_PIPES pH 4.5
N.D.
N.D.
-0.5
+0.2
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
+0.3
-0.4
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
+0.1
-0.2
-0.1
pH
R2A_PIPES pH 4
N.D.
N.D.
+0.7
-0.3
-0.5
pH
R2A_PIPES pH 4.25
N.D.
N.D.
+0.4
+0.1
-0.4
no stress control
no stress control
N.D.
N.D.
+0.3
-0.3
+0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
N.D.
N.D.
+0.4
-0.4
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
N.D.
+0.5
-0.4
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
N.D.
+1.9
+0.0
+0.1
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