Fitness for 5 genes in Rhodanobacter sp. FW510-T8

Add gene:

Number of genes on each side:  

Top 29 experiments (either direction), sorted by average fitness

Or view all 29 experiments or choose conditions or try the comparative fitness browser

500 ntwcaG and wcaA overlap by 35 nucleotideswcaA and OKGIIK_13300 overlap by 13 nucleotidesOKGIIK_13300 and cDA1 are separated by 260 nucleotidescDA1 and lysR are separated by 65 nucleotides OKGIIK_13290: wcaG - nucleoside-diphosphate sugar epimerase, at 2,866,995 to 2,868,011 wcaG OKGIIK_13295: wcaA - glycosyltransferase family 2 protein, at 2,867,977 to 2,869,368 wcaA OKGIIK_13300: OKGIIK_13300 - hypothetical protein, at 2,869,356 to 2,870,843 _13300 OKGIIK_13305: cDA1 - Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family, at 2,871,104 to 2,872,102 cDA1 OKGIIK_13310: lysR - LysR family transcriptional regulator, at 2,872,168 to 2,873,202 lysR
Group Condition OKGIIK_13290 OKGIIK_13295 OKGIIK_13300 OKGIIK_13305 OKGIIK_13310
wcaG wcaA cDA1 lysR
no stress control no stress control -0.1 -0.0 -0.2 -0.3 -0.3
no stress control no stress control -0.1 +0.0 -0.4 -0.2 +0.0
no stress control no stress control +0.2 -0.1 -0.0 -0.4 -0.3
pH R2A_PIPES pH 4.5 -0.2 +0.0 +0.0 -0.1 -0.3
pH R2A_PIPES pH 4.25 -0.1 -0.1 -0.2 +0.0 -0.2
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.1 +0.0 -0.2 -0.2 -0.3
stress R2A_PIPES with Nickel (II) chloride 424 uM -0.2 +0.1 -0.2 -0.1 -0.0
pH R2A_PIPES pH 4 -0.2 -0.1 -0.3 +0.3 -0.0
stress R2A_PIPES with Aluminum chloride 0.28125 mM -0.1 +0.1 -0.1 -0.2 -0.1
no stress control no stress control -0.0 +0.1 -0.3 -0.0 -0.2
no stress control no stress control -0.1 -0.1 -0.0 +0.1 -0.3
no stress control no stress control +0.0 +0.0 -0.2 -0.1 -0.1
stress R2A_PIPES with Cadmium chloride 128 uM -0.2 +0.0 +0.1 -0.1 -0.2
pH R2A_PIPES pH 4.5 -0.1 +0.0 -0.1 -0.1 -0.1
stress R2A_PIPES with Cobalt chloride 1024 uM +0.1 -0.1 -0.1 -0.1 -0.1
pH R2A_PIPES pH 4 -0.0 +0.0 -0.2 -0.2 +0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 -0.1 -0.1 -0.0 -0.1
stress R2A_PIPES with Cobalt chloride 512 uM -0.0 -0.0 -0.2 +0.0 +0.0
pH R2A_PIPES pH 4.25 -0.1 +0.0 -0.1 -0.0 -0.0
stress R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x -0.0 +0.1 -0.1 -0.1 -0.0
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.0 +0.1 -0.1 -0.1 +0.0
stress R2A_PIPES with Cobalt chloride 512 uM +0.1 +0.1 -0.0 -0.0 -0.1
stress R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x -0.0 +0.0 +0.1 -0.0 -0.1
stress R2A_PIPES with Cobalt chloride 1024 uM +0.1 +0.0 -0.2 +0.2 -0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.1 +0.1 +0.0 +0.0 +0.0
no stress control no stress control +0.1 -0.0 +0.2 -0.0 +0.1
no stress control no stress control +0.2 +0.1 +0.0 +0.0 -0.1
no stress control no stress control +0.1 +0.1 -0.0 +0.2 +0.1
stress R2A_PIPES with Aluminum chloride 0.28125 mM +0.0 +0.1 +0.0 +0.1 +0.0
remove
OKGIIK_13290
plot		 remove
OKGIIK_13295
plot		 remove
OKGIIK_13300		 remove
OKGIIK_13305
plot		 remove
OKGIIK_13310
plot