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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_13280 and OKGIIK_13285 are separated by 28 nucleotides
OKGIIK_13285 and wcaG are separated by 258 nucleotides
wcaG and wcaA overlap by 35 nucleotides
wcaA and OKGIIK_13300 overlap by 13 nucleotides
OKGIIK_13280: OKGIIK_13280 - Acyltransferase, at 2,865,482 to 2,866,078
_13280
OKGIIK_13285: OKGIIK_13285 - LysE type translocator, at 2,866,107 to 2,866,736
_13285
OKGIIK_13290: wcaG - nucleoside-diphosphate sugar epimerase, at 2,866,995 to 2,868,011
wcaG
OKGIIK_13295: wcaA - glycosyltransferase family 2 protein, at 2,867,977 to 2,869,368
wcaA
OKGIIK_13300: OKGIIK_13300 - hypothetical protein, at 2,869,356 to 2,870,843
_13300
Group
Condition
OKGIIK
_13280
OKGIIK
_13285
OKGIIK
_13290
OKGIIK
_13295
OKGIIK
_13300
wcaG
wcaA
pH
R2A_PIPES pH 4.5
-1.3
-0.3
-0.2
+0.0
+0.0
pH
R2A_PIPES pH 4
-0.1
-0.3
-0.2
-0.1
-0.3
pH
R2A_PIPES pH 4
-0.7
-0.0
-0.0
+0.0
-0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.4
-0.3
+0.1
-0.1
-0.1
no stress control
no stress control
-0.1
-0.1
-0.1
+0.0
-0.4
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.6
+0.0
+0.1
+0.0
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.4
-0.1
+0.1
-0.1
-0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.3
-0.2
-0.2
+0.0
+0.1
pH
R2A_PIPES pH 4.25
-0.3
-0.1
-0.1
+0.0
-0.1
no stress control
no stress control
-0.3
+0.1
-0.1
-0.0
-0.2
no stress control
no stress control
-0.3
-0.0
-0.0
+0.1
-0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.1
+0.0
+0.1
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.3
-0.2
+0.1
+0.1
-0.0
no stress control
no stress control
-0.1
-0.1
+0.0
+0.0
-0.2
no stress control
no stress control
-0.1
-0.2
+0.2
-0.1
-0.0
pH
R2A_PIPES pH 4.25
+0.3
-0.2
-0.1
-0.1
-0.2
pH
R2A_PIPES pH 4.5
+0.1
-0.2
-0.1
+0.0
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.4
-0.0
-0.0
+0.0
+0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.2
-0.0
-0.2
+0.1
-0.2
no stress control
no stress control
-0.1
-0.0
+0.1
+0.1
-0.0
no stress control
no stress control
+0.0
-0.2
+0.1
-0.0
+0.2
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.2
-0.3
+0.0
+0.1
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.0
+0.1
+0.0
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.4
-0.1
-0.0
+0.1
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.5
-0.1
-0.1
+0.1
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.0
-0.1
+0.1
+0.0
no stress control
no stress control
+0.5
-0.1
-0.1
-0.1
-0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.6
-0.0
-0.0
-0.0
-0.2
no stress control
no stress control
+0.1
-0.1
+0.2
+0.1
+0.0
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