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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
pip and pepN are separated by 184 nucleotides
pepN and OKGIIK_13175 are separated by 144 nucleotides
OKGIIK_13175 and eRG3 are separated by 150 nucleotides
eRG3 and ygjP are separated by 19 nucleotides
OKGIIK_13165: pip - prolyl aminopeptidase, at 2,841,870 to 2,842,823
pip
OKGIIK_13170: pepN - aminopeptidase, at 2,843,008 to 2,844,861
pepN
OKGIIK_13175: OKGIIK_13175 - Alpha/beta hydrolase, at 2,845,006 to 2,845,992
_13175
OKGIIK_13180: eRG3 - Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily, at 2,846,143 to 2,846,730
eRG3
OKGIIK_13185: ygjP - metal-dependent hydrolase, at 2,846,750 to 2,847,520
ygjP
Group
Condition
OKGIIK
_13165
OKGIIK
_13170
OKGIIK
_13175
OKGIIK
_13180
OKGIIK
_13185
pip
pepN
eRG3
ygjP
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
-0.2
-0.1
-0.3
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.0
-0.0
-0.2
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.4
+0.0
+0.0
+0.0
+0.0
no stress control
no stress control
+0.2
-0.0
-0.1
-0.2
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
-0.1
-0.1
-0.1
-0.0
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.2
+0.1
-0.2
-0.2
-0.2
no stress control
no stress control
+0.1
+0.1
-0.1
-0.2
-0.1
no stress control
no stress control
-0.0
+0.0
-0.0
-0.1
-0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.1
+0.0
-0.1
-0.2
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.0
+0.1
-0.0
+0.0
-0.2
no stress control
no stress control
-0.5
-0.1
+0.0
+0.1
+0.3
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
-0.0
-0.1
-0.0
+0.1
no stress control
no stress control
+0.3
-0.0
-0.1
-0.1
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.2
+0.2
+0.0
+0.0
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.4
+0.1
-0.1
-0.2
+0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.3
+0.1
-0.1
-0.1
+0.1
no stress control
no stress control
+0.5
-0.1
-0.1
-0.3
+0.3
no stress control
no stress control
-0.0
+0.1
-0.0
+0.3
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.1
+0.2
-0.1
+0.1
no stress control
no stress control
+0.2
+0.1
-0.0
-0.1
+0.4
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
-0.0
+0.2
-0.1
+0.4
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.2
+0.1
+0.1
+0.0
+0.1
pH
R2A_PIPES pH 4.25
+0.1
+0.0
+0.3
+0.3
+0.1
pH
R2A_PIPES pH 4.25
+0.1
+0.1
+0.2
+0.4
+0.1
pH
R2A_PIPES pH 4.5
+0.4
-0.0
+0.3
-0.1
+0.4
pH
R2A_PIPES pH 4.5
+0.2
+0.1
+0.3
+0.2
+0.3
pH
R2A_PIPES pH 4
+0.3
+0.0
+0.4
+0.6
+0.0
pH
R2A_PIPES pH 4
-0.0
+0.2
+0.3
+0.8
+0.1
no stress control
no stress control
+0.6
+0.2
+0.1
+0.0
+0.4
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OKGIIK_13175
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