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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
ung and pleD overlap by 4 nucleotides
pleD and ftsX are separated by 138 nucleotides
ftsX and ftsE overlap by 4 nucleotides
ftsE and OKGIIK_12950 are separated by 110 nucleotides
OKGIIK_12930: ung - uracil-DNA glycosylase, at 2,790,618 to 2,791,340
ung
OKGIIK_12935: pleD - response regulator, at 2,791,337 to 2,792,179
pleD
OKGIIK_12940: ftsX - permease-like cell division protein FtsX, at 2,792,318 to 2,793,298
ftsX
OKGIIK_12945: ftsE - cell division ATP-binding protein FtsE, at 2,793,295 to 2,793,972
ftsE
OKGIIK_12950: OKGIIK_12950 - ATP-dependent RNA helicase RhlB, at 2,794,083 to 2,795,861
_12950
Group
Condition
OKGIIK
_12930
OKGIIK
_12935
OKGIIK
_12940
OKGIIK
_12945
OKGIIK
_12950
ung
pleD
ftsX
ftsE
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.5
-0.3
-0.5
-1.2
-0.9
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.8
-0.5
-0.5
+0.0
-1.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.3
-0.2
-0.4
-0.3
-0.7
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.2
-0.2
-0.3
-0.7
-0.5
no stress control
no stress control
-0.3
-0.2
+0.1
-0.8
-0.7
no stress control
no stress control
-0.3
-0.3
-0.1
-0.5
-0.6
no stress control
no stress control
+0.0
-0.2
-0.1
-0.5
-0.6
no stress control
no stress control
+0.1
+0.2
+0.2
-1.6
-0.2
no stress control
no stress control
-0.7
-0.2
-0.3
+0.5
-0.5
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.3
-0.3
+0.0
-0.0
-0.8
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.1
-0.4
+0.2
-0.3
+0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.3
-0.0
+0.2
+0.1
-0.6
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.0
+0.0
-0.1
+0.2
-0.7
no stress control
no stress control
-0.1
-0.1
-0.2
+0.7
-0.6
no stress control
no stress control
-0.1
-0.1
-0.1
+0.2
-0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.1
+0.1
-0.1
-0.2
-0.2
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.2
-0.5
+0.0
+0.5
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.0
-0.0
+0.1
+0.3
-0.3
pH
R2A_PIPES pH 4.5
+0.1
+0.2
+0.0
+0.0
-0.0
no stress control
no stress control
-0.0
-0.0
+0.1
+0.6
-0.0
pH
R2A_PIPES pH 4
+0.3
+0.4
-0.1
-0.1
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
-0.1
+0.3
+0.6
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.1
+0.4
+0.7
+0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.1
-0.1
+0.1
+1.1
+0.2
no stress control
no stress control
+0.0
+0.3
+0.1
+1.2
-0.0
pH
R2A_PIPES pH 4.5
+0.2
+0.1
+0.4
+1.0
+0.2
pH
R2A_PIPES pH 4.25
+0.1
+0.4
+0.4
+0.8
+0.6
pH
R2A_PIPES pH 4
+0.4
+0.4
-0.1
+0.9
+0.7
pH
R2A_PIPES pH 4.25
+0.2
+0.3
+0.4
+0.8
+0.7
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