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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_12725 and lpxH are separated by 93 nucleotides
lpxH and grxD are separated by 81 nucleotides
grxD and OKGIIK_12740 are separated by 95 nucleotides
OKGIIK_12740 and OKGIIK_12745 are separated by 103 nucleotides
OKGIIK_12725: OKGIIK_12725 - Lysophospholipase, at 2,742,218 to 2,742,829
_12725
OKGIIK_12730: lpxH - UDP-2,3-diacylglucosamine hydrolase, at 2,742,923 to 2,743,789
lpxH
OKGIIK_12735: grxD - Grx4 family monothiol glutaredoxin, at 2,743,871 to 2,744,794
grxD
OKGIIK_12740: OKGIIK_12740 - Aspartyl beta-hydroxylase, at 2,744,890 to 2,746,203
_12740
OKGIIK_12745: OKGIIK_12745 - Sulfotransferase, at 2,746,307 to 2,747,689
_12745
Group
Condition
OKGIIK
_12725
OKGIIK
_12730
OKGIIK
_12735
OKGIIK
_12740
OKGIIK
_12745
lpxH
grxD
no stress control
no stress control
-0.7
-0.0
-0.4
-0.2
+0.1
no stress control
no stress control
-0.1
-0.2
-0.4
-0.1
-0.0
pH
R2A_PIPES pH 4.5
-0.6
+0.0
-0.0
+0.0
-0.2
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.1
-0.2
-0.4
-0.1
+0.2
no stress control
no stress control
-0.2
-0.1
-0.2
-0.2
+0.0
no stress control
no stress control
-0.9
+0.3
-0.2
-0.0
+0.3
no stress control
no stress control
-0.4
+0.2
-0.3
-0.1
+0.1
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.0
-0.0
-0.1
-0.2
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
-0.1
-0.2
+0.0
-0.1
no stress control
no stress control
-0.1
+0.0
-0.4
-0.0
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
-0.0
-0.3
-0.2
+0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.0
+0.1
-0.2
-0.2
+0.1
pH
R2A_PIPES pH 4
+0.0
-0.5
+0.1
+0.2
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.0
+0.0
-0.3
-0.1
+0.1
no stress control
no stress control
-0.0
-0.0
-0.3
+0.0
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
-0.0
+0.0
-0.2
-0.2
pH
R2A_PIPES pH 4.25
+0.1
+0.0
-0.0
-0.1
-0.1
no stress control
no stress control
+0.2
+0.2
-0.3
-0.1
+0.1
pH
R2A_PIPES pH 4.5
+0.2
-0.1
-0.0
+0.1
-0.0
pH
R2A_PIPES pH 4.25
+0.2
-0.1
+0.1
-0.1
-0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
+0.1
-0.2
+0.0
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.3
+0.2
+0.1
-0.4
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
+0.0
-0.0
+0.1
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.3
+0.1
-0.1
-0.1
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.0
-0.1
+0.1
+0.3
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.4
+0.0
+0.1
-0.1
-0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.1
+0.3
+0.0
+0.2
-0.0
no stress control
no stress control
+0.2
+0.2
-0.3
+0.1
+0.3
pH
R2A_PIPES pH 4
+0.6
+0.1
+0.1
+0.1
+0.1
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