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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_12490 and OKGIIK_12495 are separated by 407 nucleotides
OKGIIK_12495 and OKGIIK_12500 overlap by 4 nucleotides
OKGIIK_12500 and OKGIIK_12505 overlap by 4 nucleotides
OKGIIK_12505 and dgoD overlap by 4 nucleotides
OKGIIK_12490: OKGIIK_12490 - Aldose 1-epimerase, at 2,689,948 to 2,691,072
_12490
OKGIIK_12495: OKGIIK_12495 - FadR family transcriptional regulator, at 2,691,480 to 2,692,205
_12495
OKGIIK_12500: OKGIIK_12500 - 2-keto-3-deoxy-galactonokinase, at 2,692,202 to 2,693,128
_12500
OKGIIK_12505: OKGIIK_12505 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 2,693,125 to 2,693,772
_12505
OKGIIK_12510: dgoD - galactonate dehydratase, at 2,693,769 to 2,694,917
dgoD
Group
Condition
OKGIIK
_12490
OKGIIK
_12495
OKGIIK
_12500
OKGIIK
_12505
OKGIIK
_12510
dgoD
no stress control
no stress control
-0.2
-1.3
+0.2
-0.8
-0.2
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.3
+0.9
-0.3
-1.8
-0.3
no stress control
no stress control
+0.5
-1.7
+0.6
-0.7
-0.3
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.0
-0.3
-0.2
-0.3
+0.0
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.1
-0.9
+0.3
-0.1
+0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.8
+0.4
+0.2
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
-0.0
+0.2
-0.3
-0.2
no stress control
no stress control
-0.3
+0.2
+0.4
-0.3
-0.2
no stress control
no stress control
+0.1
-0.3
+0.3
-0.0
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.0
+0.3
-0.3
+0.1
pH
R2A_PIPES pH 4.5
-0.0
-0.0
+0.3
-0.2
-0.0
pH
R2A_PIPES pH 4
+0.0
+0.5
-0.3
-0.2
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.3
+0.6
+0.3
-0.5
+0.0
no stress control
no stress control
+0.1
-0.1
+0.5
-0.4
+0.2
pH
R2A_PIPES pH 4.25
-0.1
+0.4
-0.1
+0.0
+0.0
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.2
+0.8
+0.4
-0.8
+0.1
no stress control
no stress control
-0.1
+0.2
+0.7
-0.5
-0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.2
-0.1
+0.3
+0.2
+0.1
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.1
+0.6
-0.1
+0.1
-0.1
no stress control
no stress control
-0.2
+0.2
+0.5
-0.2
+0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
+0.2
-0.0
+0.2
-0.0
pH
R2A_PIPES pH 4.5
+0.0
+0.6
+0.2
-0.4
-0.0
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
-0.1
+0.5
+0.0
+0.1
no stress control
no stress control
-0.1
+0.1
+0.2
+0.4
+0.2
pH
R2A_PIPES pH 4
-0.0
+0.8
+0.1
+0.0
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.9
+0.5
-0.3
+0.0
pH
R2A_PIPES pH 4.25
-0.0
+0.3
+0.3
+0.7
+0.1
no stress control
no stress control
-0.1
+0.7
+0.1
+0.6
+0.2
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.3
+0.7
+0.9
+0.3
+0.1
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