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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
cydB and cydX are separated by 119 nucleotides
cydX and pepP are separated by 10 nucleotides
pepP and OKGIIK_12205 overlap by 43 nucleotides
OKGIIK_12205 and OKGIIK_12210 are separated by 98 nucleotides
OKGIIK_12190: cydB - cytochrome d ubiquinol oxidase subunit II, at 2,625,612 to 2,626,742
cydB
OKGIIK_12195: cydX - cytochrome bd-I oxidase subunit CydX, at 2,626,862 to 2,627,002
cydX
OKGIIK_12200: pepP - Xaa-Pro aminopeptidase, at 2,627,013 to 2,628,392
pepP
OKGIIK_12205: OKGIIK_12205 - hypothetical protein, at 2,628,350 to 2,628,913
_12205
OKGIIK_12210: OKGIIK_12210 - TIGR02449 family protein, at 2,629,012 to 2,629,251
_12210
Group
Condition
OKGIIK
_12190
OKGIIK
_12195
OKGIIK
_12200
OKGIIK
_12205
OKGIIK
_12210
cydB
cydX
pepP
no stress control
no stress control
+0.1
+0.1
-0.2
-1.7
N.D.
pH
R2A_PIPES pH 4.5
-0.1
-0.2
-0.1
-1.0
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.2
-0.2
-0.1
-0.3
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.0
+0.0
-0.0
-0.7
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.0
+0.0
+0.2
-0.9
N.D.
no stress control
no stress control
+0.2
-0.1
-0.1
-0.5
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
-0.1
-0.2
-0.3
N.D.
pH
R2A_PIPES pH 4
+0.1
-0.5
+0.8
-1.0
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.3
-0.1
-0.2
N.D.
pH
R2A_PIPES pH 4.25
+0.1
-0.4
-0.0
+0.0
N.D.
pH
R2A_PIPES pH 4.5
+0.1
+0.6
-0.4
-0.5
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.1
-0.0
-0.1
-0.2
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.4
-0.1
-0.6
N.D.
pH
R2A_PIPES pH 4.25
+0.1
-0.2
+0.1
-0.1
N.D.
no stress control
no stress control
+0.3
+0.8
-0.4
-0.8
N.D.
no stress control
no stress control
-0.1
+0.1
-0.2
+0.1
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.1
+0.2
-0.1
-0.0
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.3
+1.5
-0.2
-0.8
N.D.
no stress control
no stress control
-0.0
-0.0
-0.3
+0.5
N.D.
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.1
+0.3
-0.1
+0.2
N.D.
no stress control
no stress control
+0.2
+0.2
-0.1
+0.1
N.D.
no stress control
no stress control
+0.2
+0.4
-0.2
+0.1
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
+0.4
+0.0
-0.1
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.0
+0.0
-0.3
+0.7
N.D.
no stress control
no stress control
+0.1
+0.7
-0.1
-0.2
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.4
-0.3
+0.6
N.D.
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.0
+0.6
+0.0
+0.2
N.D.
no stress control
no stress control
+0.0
+0.7
-0.1
+0.5
N.D.
pH
R2A_PIPES pH 4
+0.1
+0.9
+0.5
+0.4
N.D.
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