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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_12115 and OKGIIK_12120 overlap by 4 nucleotides
OKGIIK_12120 and mlaD are separated by 50 nucleotides
mlaD and mlaE are separated by 48 nucleotides
mlaE and mlaF overlap by 4 nucleotides
OKGIIK_12115: OKGIIK_12115 - Sulfate transporter, at 2,611,549 to 2,611,857
_12115
OKGIIK_12120: OKGIIK_12120 - Toluene tolerance protein, at 2,611,854 to 2,612,525
_12120
OKGIIK_12125: mlaD - outer membrane lipid asymmetry maintenance protein MlaD, at 2,612,576 to 2,613,427
mlaD
OKGIIK_12130: mlaE - lipid asymmetry maintenance ABC transporter permease subunit MlaE, at 2,613,476 to 2,614,252
mlaE
OKGIIK_12135: mlaF - ABC transporter ATP-binding protein, at 2,614,249 to 2,615,085
mlaF
Group
Condition
OKGIIK
_12115
OKGIIK
_12120
OKGIIK
_12125
OKGIIK
_12130
OKGIIK
_12135
mlaD
mlaE
mlaF
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
-1.0
-0.6
-0.8
-0.7
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.5
-0.7
-1.1
-0.5
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
-0.6
-0.7
-0.7
-0.7
no stress control
no stress control
N.D.
-0.4
-0.6
-0.9
-0.8
no stress control
no stress control
N.D.
-0.5
-0.4
-1.1
-0.5
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
-1.1
-0.4
-0.8
-0.2
no stress control
no stress control
N.D.
-0.5
-0.4
-0.7
-0.8
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
-0.5
-0.4
-0.3
-0.9
no stress control
no stress control
N.D.
-0.7
-0.4
-0.4
-0.6
no stress control
no stress control
N.D.
-0.6
-0.5
-0.9
-0.2
no stress control
no stress control
N.D.
-0.4
-0.4
-1.1
-0.2
no stress control
no stress control
N.D.
-0.6
-0.1
-1.0
-0.4
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
-0.6
-0.4
-0.1
-0.8
stress
R2A_PIPES with Nickel (II) chloride 424 uM
N.D.
-0.4
-0.6
-0.3
-0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.1
-0.2
-0.5
-0.9
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
-0.5
-0.4
-0.5
-0.2
no stress control
no stress control
N.D.
-0.5
-0.3
-0.3
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
-0.3
-0.4
-0.2
-0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
-0.3
-0.2
-0.2
-0.3
no stress control
no stress control
N.D.
-0.2
-0.5
-0.5
+0.2
stress
R2A_PIPES with Cadmium chloride 128 uM
N.D.
-0.2
-0.5
-0.2
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.3
+0.0
-0.1
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.1
+0.2
+0.0
+0.3
pH
R2A_PIPES pH 4.5
N.D.
+0.3
+0.5
+0.0
+0.3
pH
R2A_PIPES pH 4.5
N.D.
+0.4
+0.2
+0.5
+0.2
pH
R2A_PIPES pH 4.25
N.D.
+1.0
+0.9
+1.2
+0.9
pH
R2A_PIPES pH 4.25
N.D.
+1.0
+1.1
+1.3
+1.1
pH
R2A_PIPES pH 4
N.D.
+9.3
+9.4
+9.2
+9.4
pH
R2A_PIPES pH 4
N.D.
+9.7
+9.7
+9.6
+9.8
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